BoxplotDisturbanceCover: Disturbance percent cover, broken down by disturbance type.

In nationalparkservice/mojn-sv-rpackage: QC, Analysis, and Visualization of Spring Vegetation Data

Description

Disturbance percent cover, broken down by disturbance type.

Usage

BoxplotDisturbanceCover(conn, path.to.data, spring, field.season,
  drop.nonexistent = FALSE, data.source = "database", plot.title,
  sub.title, x.lab, y.lab, ymax, ymin, xmax, xmin)

Arguments

conn	Database connection generated from call to OpenDatabaseConnection(). Ignored if data.source is "local".
path.to.data	The directory containing the csv data exports generated from SaveDataToCsv(). Ignored if data.source is "database".
spring	Spring code to generate a plot for, e.g. "LAKE_P_BLUE0".
field.season	Optional. Field season name to filter on, e.g. "2019".
drop.nonexistent	Omit disturbances that were not observed at all? Defaults to FALSE.
data.source	Character string indicating whether to access data in the spring veg database ("database", default) or to use data saved locally ("local"). In order to access the most up-to-date data, it is recommended that you select "database" unless you are working offline or your code will be shared with someone who doesn't have access to the database.
plot.title	Optional custom plot title. Leave blank to use a sensible default. Use "" to omit the title.
sub.title	Optional custom plot subtitle. Leave blank to use a sensible default. Use "" to omit the subtitle.
x.lab	Optional X axis label. Leave blank to use a sensible default. Use "" to omit the axis label.
y.lab	Y axis label. Leave blank to use a sensible default. Use "" to omit the axis label.
ymax	Optional maximum y limit.
ymin	Optional minimum y limit.
xmax	Optional maximum x limit.
xmin	Optional minimum x limit.

Details

Only includes data from visits labeled 'Primary.' Percent cover is calculated only from points at which data were collected - if only three points were recorded for a transect and one of them had bike disturbance, the disturbance type BK would have 33.3

Value

A ggplot object.

nationalparkservice/mojn-sv-rpackage documentation built on Oct. 29, 2021, 7:13 p.m.