TableSpeciesPerTransect: Table of species detected through LPI vs veg inventory

In nationalparkservice/mojn-sv-rpackage: QC, Analysis, and Visualization of Spring Vegetation Data

Description

Table of species detected through LPI vs veg inventory

Usage

TableSpeciesPerTransect(conn, path.to.data, park, spring, field.season,
  dt.options, data.source = "database", ...)

Arguments

conn	Database connection generated from call to OpenDatabaseConnection(). Ignored if data.source is "local".
path.to.data	The directory containing the csv data exports generated from SaveDataToCsv(). Ignored if data.source is "database".
park	Optional. Four-letter park code to filter on, e.g. "MOJA".
spring	Optional. Spring code to generate a plot for, e.g. "LAKE_P_BLUE0".
field.season	Optional. Field season name to filter on, e.g. "2019".
dt.options	Optional. Options to be passed to DT::datatable().
data.source	Character string indicating whether to access data in the spring veg database ("database", default) or to use data saved locally ("local"). In order to access the most up-to-date data, it is recommended that you select "database" unless you are working offline or your code will be shared with someone who doesn't have access to the database.
...	Optional. Additional arguments to be passed to DT::datatable().

Details

Omits TBD and UNK species from counts. Only includes data from visits labeled 'Primary.'

Value

An HTML widget.

nationalparkservice/mojn-sv-rpackage documentation built on Oct. 29, 2021, 7:13 p.m.