SpeciesAccumulationCurve: Species accumulation curve of one spring in one field season

In nationalparkservice/mojn-sv-rpackage: QC, Analysis, and Visualization of Spring Vegetation Data

Description

Species accumulation curve of one spring in one field season

Usage

SpeciesAccumulationCurve(conn, path.to.data, spring, field.season,
  data.source = "database", plot.title, sub.title, x.lab, y.lab, ymax,
  ymin, xmax, xmin)

Arguments

conn	Database connection generated from call to OpenDatabaseConnection(). Ignored if data.source is "local".
path.to.data	The directory containing the csv data exports generated from SaveDataToCsv(). Ignored if data.source is "database".
spring	Spring code to generate a plot for, e.g. "LAKE_P_BLUE0".
field.season	Field season name to filter on, e.g. "2019".
data.source	Character string indicating whether to access data in the spring veg database ("database", default) or to use data saved locally ("local"). In order to access the most up-to-date data, it is recommended that you select "database" unless you are working offline or your code will be shared with someone who doesn't have access to the database.
plot.title	Optional custom plot title. Leave blank to use a sensible default. Use "" to omit the title.
sub.title	Optional custom plot subtitle. Leave blank to use a sensible default. Use "" to omit the subtitle.
x.lab	Optional X axis label. Leave blank to use a sensible default. Use "" to omit the axis label.
y.lab	Y axis label. Leave blank to use a sensible default. Use "" to omit the axis label.
ymax	Optional maximum y limit.
ymin	Optional minimum y limit.
xmax	Optional maximum x limit.
xmin	Optional minimum x limit.

Details

Only includes data from visits labeled 'Primary.' Does not include UNKS but does include To Be Determined unknown species.

Value

A ggplot object.

nationalparkservice/mojn-sv-rpackage documentation built on Oct. 29, 2021, 7:13 p.m.