Files in natverse/flycircuit

Functions to support the analysis of the FlyCircuit single neuron dataset

.Rbuildignore

.github/SUPPORT.md

.gitignore

.travis.yml

DESCRIPTION

LICENSE.md

NAMESPACE

NEWS.md R/clustering.R R/flycircuit-data.R R/flycircuit-ids.R R/flycircuit-package.r R/ids.R R/loading.R R/nblast.R R/open-flycircuit.R R/plotting.R R/read-neurons.R R/registration.R R/zzz.R README.md

_pkgdown.yml

data-raw/flycircuit.bib

data-raw/make-citation.R

data/FCWB.surf.rda

data/FCWBNP.surf.rda

data/annotation.rda

data/fcidtable.rda

data/kcs20scores.rda

docs/LICENSE.html

docs/SUPPORT.html

docs/articles/CanvasMatrix.js

docs/articles/index.html

docs/articles/quick-start.html

docs/articles/quick-start.md docs/articles/quick-start_files/figure-html/blasting-1.pdf

docs/articles/quick-start_files/figure-html/blasting-1.png

docs/articles/quick-start_files/figure-html/cluster-kcs-1.pdf

docs/articles/quick-start_files/figure-html/cluster-kcs-1.png

docs/articles/quick-start_files/figure-html/plot-bad-hits-1.png

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docs/articles/quick-start_files/figure-html/plot-kcs-1.png

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docs/articles/quick-start_files/figure-html/rgl-cluster-kcs-1.png

docs/articles/vpns-example.html

docs/articles/vpns-example.md

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docs/authors.html

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/jquery.sticky-kit.min.js

docs/link.svg

docs/logo.svg

docs/news/index.html

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/FCWB.surf.html

docs/reference/FCWBNP.surf.html

docs/reference/annotation.html

docs/reference/apclusterfc.html

docs/reference/as.data.frame.APResult.html

docs/reference/download.file.wcheck.html

docs/reference/dpscan.html

docs/reference/drawRegionSurf.html

docs/reference/fc_attach_bigmat.html

docs/reference/fc_attach_ff.html

docs/reference/fc_download_data.html

docs/reference/fc_get_ids.html

docs/reference/fc_glom.html

docs/reference/fc_nblast.html

docs/reference/fc_neuron_type.html

docs/reference/fc_page.html

docs/reference/fc_read_neurons.html

docs/reference/fc_sex.html

docs/reference/fc_subscoremat.html

docs/reference/fcgn_forfile.html

docs/reference/fcidtable.html

docs/reference/fcwbnpsurf.html

docs/reference/fcwbsurf.html

docs/reference/figures/logo.svg

docs/reference/flycircuit-ids.html

docs/reference/flycircuit-package.html

docs/reference/flycircuit.html

docs/reference/getRegionSurf.html

docs/reference/getRegionsFromSurf.html

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docs/reference/hclustfc.html

docs/reference/index.html

docs/reference/kcs20scores.html

docs/reference/load_fcdata.html

docs/reference/load_fcdb.html

docs/reference/load_si_data.html

docs/reference/plot3d.APResult.html

docs/reference/plot3dfc.html

docs/reference/pop3dfc.html

docs/reference/selectRegionsFromSurf.html

flycircuit.Rproj

inst/CITATION

inst/extdata/affine/FCWB_typicalbrainfemale_01_9dof.list/cmd.sh

inst/extdata/affine/FCWB_typicalbrainfemale_01_9dof.list/registration

inst/extdata/affine/FCWB_typicalbrainfemale_01_9dof.list/settings

inst/extdata/affine/FCWB_typicalbrainfemale_01_9dof.list/statistics

inst/extdata/affine/FCWB_typicalbrainfemale_01_9dof.list/studylist

inst/reg/FCWB_typicalbrainfemale_01_warp_m0g80c8e1e-1x26r4.list/cmd.sh

inst/reg/FCWB_typicalbrainfemale_01_warp_m0g80c8e1e-1x26r4.list/registration.gz

inst/reg/FCWB_typicalbrainfemale_01_warp_m0g80c8e1e-1x26r4.list/settings

inst/reg/FCWB_typicalbrainfemale_01_warp_m0g80c8e1e-1x26r4.list/statistics

inst/reg/FCWB_typicalbrainfemale_01_warp_m0g80c8e1e-1x26r4.list/studylist

inst/reg/FCWB_typicalbrainmale_01_warp_m0g80c8e1e-1x26r4.list/cmd.sh

inst/reg/FCWB_typicalbrainmale_01_warp_m0g80c8e1e-1x26r4.list/registration.gz

inst/reg/FCWB_typicalbrainmale_01_warp_m0g80c8e1e-1x26r4.list/settings

inst/reg/FCWB_typicalbrainmale_01_warp_m0g80c8e1e-1x26r4.list/statistics

inst/reg/FCWB_typicalbrainmale_01_warp_m0g80c8e1e-1x26r4.list/studylist

man/FCWB.surf.Rd man/FCWBNP.surf.Rd man/annotation.Rd man/apclusterfc.Rd man/as.data.frame.APResult.Rd man/download.file.wcheck.Rd man/dpscan.Rd man/drawRegionSurf.Rd man/fc_attach_bigmat.Rd man/fc_attach_ff.Rd man/fc_download_data.Rd man/fc_get_ids.Rd man/fc_glom.Rd man/fc_nblast.Rd man/fc_neuron_type.Rd man/fc_page.Rd man/fc_read_neurons.Rd man/fc_sex.Rd man/fc_subscoremat.Rd man/fcgn_forfile.Rd man/fcidtable.Rd man/fcwbnpsurf.Rd man/fcwbsurf.Rd

man/figures/logo.svg

man/flycircuit-ids.Rd man/flycircuit-package.Rd man/getRegionSurf.Rd man/getRegionsFromSurf.Rd man/hclustfc.Rd man/kcs20scores.Rd man/load_fcdata.Rd man/load_fcdb.Rd man/load_si_data.Rd man/plot3d.APResult.Rd man/plot3dfc.Rd man/pop3dfc.Rd man/selectRegionsFromSurf.Rd tests/test-all.R tests/testthat/test-clustering.R tests/testthat/test-ids.R tests/testthat/test-loading.R tests/testthat/test-nblast.R tests/testthat/test-onLoad.R tests/testthat/test-plotting.R tests/testthat/test-registration.R

vignettes/.gitignore

vignettes/quick-start.Rmd

natverse/flycircuit documentation built on Jan. 26, 2023, 6:46 p.m.