ncborcherding/scRepertoire
A toolkit for single-cell immune receptor profiling

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A toolkit for single-cell immune receptor profiling

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DESCRIPTION
LICENSE
NAMESPACE
NEWS.md R/RcppExports.R R/addVariable.R R/alluvialClones.R R/clonalAbundance.R R/clonalBias.R R/clonalCluster.R R/clonalCompare.R R/clonalDiversity.R R/clonalHomeostasis.R R/clonalLength.R R/clonalNetwork.R R/clonalOccupy.R R/clonalOverlap.R R/clonalOverlay.R R/clonalProportion.R R/clonalQuant.R R/clonalRarefaction.R R/clonalScatter.R R/clonalSizeDistribution.R R/combineContigs.R R/combineExpression.R R/createHTOContigList.R R/data.R R/exportClones.R R/getCircilize.R R/getContigDoublets.R R/global.R R/highlightClones.R R/loadContigs.R R/percentAA.R R/percentGenes.R R/percentKmer.R R/percentVJ.R R/positionalEntropy.R R/positionalProperty.R R/scRepertoire-package.R R/seurat_command.R R/startracDiversity.R R/subsetClone.R R/typecheck.R R/utils.R R/vizGenes.R README.md
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tests/testthat/testdata/visualizations/percentGenes_exportTable.rds
tests/testthat/testdata/visualizations/percentVJ_exportTable.rds
vignettes/.gitignore
vignettes/articles/Attaching_SC.Rmd vignettes/articles/Clonal_Bias.Rmd vignettes/articles/Clonal_Cluster.Rmd vignettes/articles/Clonal_Diversity.Rmd vignettes/articles/Clonal_Dynamics.Rmd vignettes/articles/Clonal_Visualizations.Rmd vignettes/articles/Combining_Contigs.Rmd vignettes/articles/FAQ.Rmd vignettes/articles/Ibex.Rmd vignettes/articles/Installation.Rmd vignettes/articles/Loading.Rmd vignettes/articles/Processing.Rmd vignettes/articles/Repertoire_Summary.Rmd vignettes/articles/Running_Escape.Rmd vignettes/articles/SC_Visualizations.Rmd vignettes/articles/Trex.Rmd vignettes/articles/immApex.Rmd vignettes/vignette.Rmd
ncborcherding/scRepertoire documentation built on Nov. 5, 2024, 2:05 p.m.

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