basicKineticModel: Basic Kinetic Model Constructor

In ndukler/tkSim: Simulates transcript abundance based on synthesis and degredation rates

Description

Contructs a simple kinetic model object from synthesis and degredation rates

Usage

basicKineticModel(times = NA_real_, synthRate = NA_real_,
  degRate = NA_real_, initVals = NA_real_, ids = NA, data = NULL,
  spikeIns = NULL, expMetadata = data.frame(), normFactors = NA_real_,
  dispersionModel = function(x) { })

Arguments

synthRate	Synthesis rates. Must be greater than 0.
degRate	Degredation rate. Must be between 0 and 1.
initVals	Initial abundances at time 0.
ids	A character string id.
data	Experimental or simulated matrix of count data
expMetadata	A data.frame where each row corresponds to the column in data with the same index and the columns are different properties

ndukler/tkSim documentation built on May 16, 2019, 8:12 p.m.