#' Living systematic review flow diagrams
#'
#' @description Produce various formats of PRISMA 2020 compliant living
#' systematic review flow diagrams with options for showing inputs from
#' previous reviews and other sources.
#' @param data A dataset ready for plotting, produced as a list
#' of items using `LSRPrisma_data()`.
#' @param previous A logical argument specifying whether the 'previous
#' studies/report' arm should be included in the flow diagram (TRUE) or
#' not (FALSE).
#' @param other A logical argument specifying whether the 'other
#' sources' arm should be included in the flow diagram (TRUE) or
#' not (FALSE).
#' @return A LSR Prisma plot of the data plotted onto a flow
#' diagram.
#' @import ggplot2
#' @importFrom ggpubr theme_transparent
#' @examples
#' \dontrun{
#' data <- read.csv('inst/extdata/approach2.csv', stringsAsFactors=FALSE)
#' flowdata <- LSRPrisma_data(data)
#' plot <- LSRPrisma_flow(flowdata, previous = FALSE, other = TRUE)
#' plot
#' }
#' @export
LSRPrisma_flow <- function(data,
previous = TRUE,
other = TRUE){
geom_rrect <- utils::getFromNamespace("geom_rrect", "statebins")
#Box dimensions
#Table data positions
#x positions for each column
cols <- ncol(data$database_results) #number of columns of data
col_width <- 1.625
col_mid_x <- (seq(1:cols) * col_width) - (col_width / 2)
#set font size
font_size <- 2 + (1/cols)
#set box sizes
box_width <- col_width * cols
box_width0 <- box_width / 1.5
box_height1 <- 2.5
box_height2 <- 4
box_height3 <- 5.9
basey <- 0
basex <- 0
label_width <- box_width / 13
gap_width <- label_width
#excluded box heights
dbrexclheight <- box_height1 + (data$excl_lines * 0.5) + 0.5
otherexclheight <- box_height1 + (data$excl_lines_other * 0.5) + 0.5
#Column names - if two words, split across lines
if (lengths(regmatches(colnames(data[[3]][1]), gregexpr(" ", colnames(data[[3]][1])))) < 2){
columns <- gsub(' ', '\n', colnames(data[[3]]))
} else {
columns <- colnames(data[[3]])
}
#Column xmin
column1 <- basex + label_width + gap_width
column2 <- column1 + box_width0 + gap_width
#Box labels and positions
#Vertical boxes
#included_box
incl_lab <- "Included"
incl_xmin <- basex #box left limit
incl_xmax <- incl_xmin + label_width #box right limit
incl_ymin <- basey #box bottom limit
if (previous == TRUE){
incl_ymax <- incl_ymin + (2 * box_height2) + 1 #box top limit
} else {
incl_ymax <- incl_ymin + box_height2 #box top limit
}
incl_lab_x <- incl_xmin + ((incl_xmax - incl_xmin) / 2) #x label location
incl_lab_y <- incl_ymin + ((incl_ymax - incl_ymin) / 2) #y label location
#screening_box
screen_lab <- "Screening"
screen_xmin <- incl_xmin #box left limit
screen_xmax <- incl_xmax #box right limit
screen_ymin <- incl_ymax + 1 #box bottom limit
screen_ymax <- screen_ymin + (3 * box_height1) + 2 #box top limit
screen_lab_x <- screen_xmin + ((screen_xmax - screen_xmin) / 2) #x label location
screen_lab_y <- screen_ymin + ((screen_ymax - screen_ymin) / 2) #y label location
#identification_box
ident_lab <- "Identification"
ident_xmin <- incl_xmin #box left limit
ident_xmax <- incl_xmax #box right limit
ident_ymin <- screen_ymax + 1 #box bottom limit
ident_ymax <- ident_ymin + box_height3 #box top limit
ident_lab_x <- ident_xmin + ((ident_xmax - ident_xmin) / 2) #x label location
ident_lab_y <- ident_ymin + ((ident_ymax - ident_ymin) / 2) #y label location
#Title boxes
#previous_box
prev_lab <- "Previous studies"
prev_xmin <- column1 #box left limit
prev_xmax <- prev_xmin + box_width0 #box right limit
prev_ymin <- ident_ymax + 1 #box bottom limit
prev_ymax <- prev_ymin + 1 #box top limit
prev_lab_x <- prev_xmin + ((prev_xmax - prev_xmin) / 2) #x label location
prev_lab_y <- prev_ymin + ((prev_ymax - prev_ymin) / 2) #y label location
#dbr_box
dbr_lab <- "Identification of new studies via databases and registers"
if (previous == TRUE){
dbr_xmin <- column2 #box left limit
} else {
dbr_xmin <- column1 #box left limit
}
dbr_xmax <- dbr_xmin + gap_width + (box_width * 2) #box right limit
dbr_ymin <- ident_ymax + 1 #box bottom limit
dbr_ymax <- dbr_ymin + 1 #box top limit
dbr_lab_x <- dbr_xmin + ((dbr_xmax - dbr_xmin) / 2) #x label location
dbr_lab_y <- dbr_ymin + ((dbr_ymax - dbr_ymin) / 2) #y label location
#other_box
other_lab <- "Identification of new studies via other methods"
other_xmin <- dbr_xmax + gap_width #box left limit
other_xmax <- other_xmin + gap_width + (box_width * 2) #box right limit
other_ymin <- dbr_ymin #box bottom limit
other_ymax <- dbr_ymax #box top limit
other_lab_x <- other_xmin + ((other_xmax - other_xmin) / 2) #x label location
other_lab_y <- other_ymin + ((other_ymax - other_ymin) / 2) #y label location
#Data boxes
#Total box
tot_lab1 <- "Total studies included in review"
tot_lab2 <- "Total reports included in review"
tot_xmin <- dbr_xmin #box left limit (set by position of box1 right limit)
tot_xmax <- tot_xmin + box_width #box right limit
tot_ymin <- basey #start point vertically
tot_ymax <- tot_ymin + box_height2 #as above
tot_lab_x1 <- tot_xmin + ((tot_xmax - tot_xmin) / 2) #x label 1 location
tot_lab_y1 <- tot_ymax - 0.3 #y label 1 location
tot_data_x1 <- tot_lab_x1 #x data 1 location
tot_data_y1 <- tot_lab_y1 - 1.4 #y data 1 location
tot_lab_x2 <- tot_lab_x1 #x label 2 location
tot_lab_y2 <- tot_data_y1 - 1.2 #y label 2 location
tot_data_x2 <- tot_lab_x1 #x data 2 location
tot_data_y2 <- tot_lab_y2 - 0.7 #y data 2 location
#New box
new_lab1 <- "New studies included in review"
new_lab2 <- "New reports included in review"
new_xmin <- dbr_xmin #box left limit (set by position of box1 right limit)
new_xmax <- new_xmin + box_width #box right limit
if (previous == TRUE) {
new_ymin <- tot_ymax + 1 #box bottom limit
} else {
new_ymin <- basey #box bottom limit
}
new_ymax <- new_ymin + box_height2 #as above
new_lab_x1 <- new_xmin + ((new_xmax - new_xmin) / 2) #x label 1 location
new_lab_y1 <- new_ymax - 0.3 #y label 1 location
new_data_x1 <- new_lab_x1 #x data 1 location
new_data_y1 <- new_lab_y1 - 1.4 #y data 1 location
new_lab_x2 <- new_lab_x1 #x label 2 location
new_lab_y2 <- new_data_y1 - 1.2 #y label 2 location
new_data_x2 <- new_lab_x1 #x data 2 location
new_data_y2 <- new_lab_y2 - 0.7 #y data 2 location
#DB Reports assessed
dbrrep_lab <- "Reports assessed for eligibility"
dbrrep_xmin <- dbr_xmin #as above
dbrrep_xmax <- dbr_xmin + box_width #as above
dbrrep_ymin <- new_ymax + 1 #box bottom limit
dbrrep_ymax <- dbrrep_ymin + box_height1 #box top limit
dbrrep_lab_x <- dbrrep_xmin + ((dbrrep_xmax - dbrrep_xmin) / 2) #x label location
dbrrep_lab_y <- dbrrep_ymax - 0.3 #y label location
dbrrep_data_x <- dbrrep_lab_x #x data location
dbrrep_data_y <- dbrrep_lab_y - 1.4 #y data location
#DB Reports excluded
dbrrepexcl_lab <- "Reports excluded"
dbrrepexcl_xmin <- dbrrep_xmax + gap_width #as above
dbrrepexcl_xmax <- dbrrepexcl_xmin + box_width #as above
dbrrepexcl_ymax <- dbrrep_ymax #box top limit
dbrrepexcl_ymin <- dbrrepexcl_ymax - dbrexclheight #box bottom limit
dbrrepexcl_lab_x <- dbrrepexcl_xmin + ((dbrrepexcl_xmax - dbrrepexcl_xmin) / 2) #x label location
dbrrepexcl_lab_y <- dbrrepexcl_ymax - 0.3 #y label location
dbrrepexcl_data_x <- dbrrepexcl_lab_x #x data location
dbrrepexcl_data_y <- dbrrepexcl_lab_y - 1.4 #y data location
dbrrepexclreasons_lab_y <- dbrrepexcl_ymax - 2.75 #y reasons location
#other Reports assessed
otherrep_lab <- "Reports assessed for eligibility"
otherrep_xmin <- dbrrepexcl_xmax + gap_width #as above
otherrep_xmax <- otherrep_xmin + box_width #as above
otherrep_ymin <- dbrrep_ymin #box bottom limit
otherrep_ymax <- otherrep_ymin + box_height1 #box top limit
otherrep_lab_x <- otherrep_xmin + ((otherrep_xmax - otherrep_xmin) / 2) #x label location
otherrep_lab_y <- otherrep_ymax - 0.3 #y label location
otherrep_data_x <- otherrep_lab_x #x data location
otherrep_data_y <- otherrep_lab_y - 1.4 #y data location
#other Reports excluded
otherrepexcl_lab <- "Reports excluded"
otherrepexcl_xmin <- otherrep_xmax + gap_width #as above
otherrepexcl_xmax <- otherrepexcl_xmin + box_width #as above
otherrepexcl_ymax <- otherrep_ymax #box top limit
otherrepexcl_ymin <- otherrepexcl_ymax - otherexclheight #box bottom limit
otherrepexcl_lab_x <- otherrepexcl_xmin + ((otherrepexcl_xmax - otherrepexcl_xmin) / 2) #x label location
otherrepexcl_lab_y <- otherrepexcl_ymax - 0.3 #y label location
otherrepexcl_data_x <- otherrepexcl_lab_x #x data location
otherrepexcl_data_y <- otherrepexcl_lab_y - 1.4 #y data location
otherrepexclreasons_lab_y <- otherrepexcl_ymax - 2.75 #y reasons location
#DB Reports sought
dbrrepsought_lab <- "Reports sought for retrieval"
dbrrepsought_xmin <- dbr_xmin #as above
dbrrepsought_xmax <- dbr_xmin + box_width #as above
dbrrepsought_ymin <- dbrrep_ymax + 1 #box bottom limit
dbrrepsought_ymax <- dbrrepsought_ymin + box_height1 #box top limit
dbrrepsought_lab_x <- dbrrepsought_xmin + ((dbrrepsought_xmax - dbrrepsought_xmin) / 2) #x label location
dbrrepsought_lab_y <- dbrrepsought_ymax - 0.3 #y label location
dbrrepsought_data_x <- dbrrepsought_lab_x #x data location
dbrrepsought_data_y <- dbrrepsought_lab_y - 1.4 #y data location
#DB Reports not retrieved
dbrrepnotret_lab <- "Reports not retrieved"
dbrrepnotret_xmin <- dbrrepexcl_xmin #as above
dbrrepnotret_xmax <- dbrrepnotret_xmin + box_width #as above
dbrrepnotret_ymin <- dbrrep_ymax + 1 #box bottom limit
dbrrepnotret_ymax <- dbrrepnotret_ymin + box_height1 #box top limit
dbrrepnotret_lab_x <- dbrrepnotret_xmin + ((dbrrepnotret_xmax - dbrrepnotret_xmin) / 2) #x label location
dbrrepnotret_lab_y <- dbrrepnotret_ymax - 0.3 #y label location
dbrrepnotret_data_x <- dbrrepnotret_lab_x #x data location
dbrrepnotret_data_y <- dbrrepnotret_lab_y - 1.4 #y data location
#other Reports sought
otherrepsought_lab <- "Reports sought for retrieval"
otherrepsought_xmin <- otherrep_xmin #as above
otherrepsought_xmax <- otherrepsought_xmin + box_width #as above
otherrepsought_ymin <- otherrep_ymax + 1 #box bottom limit
otherrepsought_ymax <- otherrepsought_ymin + box_height1 #box top limit
otherrepsought_lab_x <- otherrepsought_xmin + ((otherrepsought_xmax - otherrepsought_xmin) / 2) #x label location
otherrepsought_lab_y <- otherrepsought_ymax - 0.3 #y label location
otherrepsought_data_x <- otherrepsought_lab_x #x data location
otherrepsought_data_y <- otherrepsought_lab_y - 1.4 #y data location
#other Reports not retrieved
otherrepnotret_lab <- "Reports not retrieved"
otherrepnotret_xmin <- otherrepexcl_xmin #as above
otherrepnotret_xmax <- otherrepnotret_xmin + box_width #as above
otherrepnotret_ymin <- otherrepexcl_ymax + 1 #box bottom limit
otherrepnotret_ymax <- otherrepnotret_ymin + box_height1 #box top limit
otherrepnotret_lab_x <- otherrepnotret_xmin + ((otherrepnotret_xmax - otherrepnotret_xmin) / 2) #x label location
otherrepnotret_lab_y <- otherrepnotret_ymax - 0.3 #y label location
otherrepnotret_data_x <- otherrepnotret_lab_x #x data location
otherrepnotret_data_y <- otherrepnotret_lab_y - 1.4 #y data location
#DB Records screened
dbrrecscr_lab <- "Records screened"
dbrrecscr_xmin <- dbr_xmin #as above
dbrrecscr_xmax <- dbr_xmin + box_width #as above
dbrrecscr_ymin <- dbrrepsought_ymax + 1 #box bottom limit
dbrrecscr_ymax <- dbrrecscr_ymin + box_height1 #box top limit
dbrrecscr_lab_x <- dbrrecscr_xmin + ((dbrrecscr_xmax - dbrrecscr_xmin) / 2) #x label location
dbrrecscr_lab_y <- dbrrecscr_ymax - 0.3 #y label location
dbrrecscr_data_x <- dbrrecscr_lab_x #x data location
dbrrecscr_data_y <- dbrrecscr_lab_y - 1.4 #y data location
#DB Records excluded
dbrrecexcl_lab <- "Records excluded"
dbrrecexcl_xmin <- dbrrepexcl_xmin #as above
dbrrecexcl_xmax <- dbrrecexcl_xmin + box_width #as above
dbrrecexcl_ymin <- dbrrepnotret_ymax + 1 #box bottom limit
dbrrecexcl_ymax <- dbrrecexcl_ymin + box_height1 #box top limit
dbrrecexcl_lab_x <- dbrrecexcl_xmin + ((dbrrecexcl_xmax - dbrrecexcl_xmin) / 2) #x label location
dbrrecexcl_lab_y <- dbrrecexcl_ymax - 0.3 #y label location
dbrrecexcl_data_x <- dbrrecexcl_lab_x #x data location
dbrrecexcl_data_y <- dbrrecexcl_lab_y - 1.4 #y data location
#DB results identified
dbident_lab <- "Records identified from:"
dbident_lab1 <- "Databases"
dbident_lab2 <- "Registers"
dbident_xmin <- dbr_xmin #box left limit (set by position of box1 right limit)
dbident_xmax <- dbident_xmin + box_width #box right limit
dbident_ymax <- dbrrecexcl_ymax + box_height3 + 1 #as above
dbident_ymin <- dbident_ymax - box_height2 - 0.5 #as above
dbident_lab_x <- dbident_xmin + ((dbident_xmax - dbident_xmin) / 2) #x main label location
dbident_lab_y <- dbident_ymax - 0.3 #as above
dbident_lab_x1 <- dbident_xmin + ((dbident_xmax - dbident_xmin) / 2) #x label 1 location
dbident_lab_y1 <- dbident_lab_y - 0.5 #y label 1 location
dbident_data_x1 <- dbident_lab_x1 #x data 1 location
dbident_data_y1 <- dbident_lab_y1 - 1.4 #y data 1 location
dbident_lab_x2 <- dbident_lab_x1 #x label 2 location
dbident_lab_y2 <- dbident_data_y1 - 1.2 #y label 2 location
dbident_data_x2 <- dbident_lab_x1 #x data 2 location
dbident_data_y2 <- dbident_lab_y2 - 0.7 #y data 2 location
#DB Records removed
dbexcl_lab <- "Records removed before screening"
dbexcl_lab1 <- "Dupicates"
dbexcl_lab2 <- "Automation"
dbexcl_lab3 <- "Other"
dbexcl_xmin <- dbrrepexcl_xmin #as above
dbexcl_xmax <- dbexcl_xmin + box_width #as above
dbexcl_ymin <- dbrrecexcl_ymax + 1 #box bottom limit
dbexcl_ymax <- dbexcl_ymin + box_height3 #box top limit
dbexcl_lab_x <- dbexcl_xmin + ((dbexcl_xmax - dbexcl_xmin) / 2) #x label location
dbexcl_lab_y <- dbexcl_ymax - 0.3 #as above
dbexcl_data_x <- dbexcl_lab_x #x data location
dbexcl_lab_y <- dbexcl_ymax - 0.3 #as above
dbexcl_lab_x1 <- dbexcl_lab_x #x label 1 location
dbexcl_lab_y1 <- dbexcl_lab_y - 0.5 #y label 1 location
dbexcl_data_x1 <- dbexcl_lab_x1 #x data 1 location
dbexcl_data_y1 <- dbexcl_lab_y1 - 1.4 #y data 1 location
dbexcl_lab_x2 <- dbexcl_lab_x1 #x label 2 location
dbexcl_lab_y2 <- dbexcl_data_y1 - 1.2 #y label 2 location
dbexcl_data_x2 <- dbexcl_lab_x1 #x data 2 location
dbexcl_data_y2 <- dbexcl_lab_y2 - 0.7 #y data 2 location
dbexcl_lab_x3 <- dbexcl_lab_x2 #x label 2 location
dbexcl_lab_y3 <- dbexcl_data_y2 - 0.7 #y label 2 location
dbexcl_data_x3 <- dbexcl_lab_x2 #x data 2 location
dbexcl_data_y3 <- dbexcl_lab_y3 - 0.7 #y data 2 location
#other results identified
otherident_lab <- "Records identified from:"
otherident_lab1 <- "Websites"
otherident_lab2 <- "Organisations"
otherident_lab3 <- "Citations"
otherident_xmin <- otherrepsought_xmin #as above
otherident_xmax <- otherident_xmin + box_width #as above
otherident_ymax <- dbexcl_ymax #box top limit
otherident_ymin <- dbexcl_ymin #box bottom limit
otherident_lab_x <- otherident_xmin + ((otherident_xmax - otherident_xmin) / 2) #x label location
otherident_lab_y <- otherident_ymax - 0.3 #as above
otherident_data_x <- otherident_lab_x #x data location
otherident_lab_y <- otherident_ymax - 0.3 #as above
otherident_lab_x1 <- otherident_lab_x #x label 1 location
otherident_lab_y1 <- otherident_lab_y - 0.5 #y label 1 location
otherident_data_x1 <- otherident_lab_x1 #x data 1 location
otherident_data_y1 <- otherident_lab_y1 - 1.4 #y data 1 location
otherident_lab_x2 <- otherident_lab_x1 #x label 2 location
otherident_lab_y2 <- otherident_data_y1 - 1.2 #y label 2 location
otherident_data_x2 <- otherident_lab_x1 #x data 2 location
otherident_data_y2 <- otherident_lab_y2 - 0.7 #y data 2 location
otherident_lab_x3 <- otherident_lab_x2 #x label 2 location
otherident_lab_y3 <- otherident_data_y2 - 0.7 #y label 2 location
otherident_data_x3 <- otherident_lab_x2 #x data 2 location
otherident_data_y3 <- otherident_lab_y3 - 0.7 #y data 2 location
#Previous studies
prevdat_lab1 <- "Studies included in previous\nversion of review"
prevdat_lab2 <- "Reports of studies included in\nprevious version of review"
prevdat_xmin <- prev_xmin #box left limit
prevdat_xmax <- prevdat_xmin + box_width0 #box right limit
prevdat_ymin <- dbident_ymin #box bottom limit
prevdat_ymax <- dbident_ymax #box top limit
prevdat_lab_x1 <- prevdat_xmin + ((prevdat_xmax - prevdat_xmin) / 2) #x label location
prevdat_lab_y1 <- prevdat_ymax - 0.8 #y label location
prevdat_lab_x2 <- prevdat_lab_x1 #x label location
prevdat_lab_y2 <- prevdat_ymax - ((prevdat_ymax - prevdat_ymin) / 2) - 0.5 #y label location
prevdat_data_x1 <- prevdat_lab_x1
prevdat_data_y1 <- prevdat_lab_y1 - 1
prevdat_data_x2 <- prevdat_lab_x1
prevdat_data_y2 <- prevdat_lab_y2 - 1
#Create 'fake' data set to establish plot limits
if (other == TRUE){
x <- c(basex, other_xmax)
} else {
x <- c(basex, dbr_xmax)
}
y <- c(basey, ident_ymax)
df <- data.frame(x, y)
#Include 'previous' arm
if (previous == TRUE) {
#Include 'other' arm
if (other == TRUE){
#Generate plot
canvas <- ggplot(df, aes(x = x, y = y)) +
ggpubr::theme_transparent(base_size = 12, base_family = "") +
scale_x_continuous(name="x") +
scale_y_continuous(name="y")
plot <- canvas +
geom_rrect(mapping=aes(xmin=ident_xmin, xmax=ident_xmax, ymin=ident_ymin, ymax=ident_ymax), color="#bcd1ee", fill="#bcd1ee") + #identification box
geom_rrect(mapping=aes(xmin=screen_xmin, xmax=screen_xmax, ymin=screen_ymin, ymax=screen_ymax), color="#bcd1ee", fill="#bcd1ee") + #screening box
geom_rrect(mapping=aes(xmin=incl_xmin, xmax=incl_xmax, ymin=incl_ymin, ymax=incl_ymax), color="#bcd1ee", fill="#bcd1ee") + #included box
geom_rrect(mapping=aes(xmin=prev_xmin, xmax=prev_xmax, ymin=prev_ymin, ymax=prev_ymax), color="#dcdcdc", fill="#dcdcdc") + #previous box
geom_rrect(mapping=aes(xmin=dbr_xmin, xmax=dbr_xmax, ymin=dbr_ymin, ymax=dbr_ymax), color="#ffc125", fill="#ffc125") + #dbr box
geom_rrect(mapping=aes(xmin=other_xmin, xmax=other_xmax, ymin=other_ymin, ymax=other_ymax), color="#dcdcdc", fill="#dcdcdc") + #other box
annotate(geom="text", x=ident_lab_x, y=ident_lab_y, label=ident_lab, color="black", size=font_size, angle = 90) +
annotate(geom="text", x=screen_lab_x, y=screen_lab_y, label=screen_lab, color="black", size=font_size, angle = 90) +
annotate(geom="text", x=incl_lab_x, y=incl_lab_y, label=incl_lab, color="black", size=font_size, angle = 90) +
annotate(geom="text", x=prev_lab_x, y=prev_lab_y, label=prev_lab, color="black", size=font_size) +
annotate(geom="text", x=dbr_lab_x, y=dbr_lab_y, label=dbr_lab, color="black", size=font_size) +
annotate(geom="text", x=other_lab_x, y=other_lab_y, label=other_lab, color="black", size=font_size) +
#arrows
geom_segment(aes(x = dbident_xmin+(box_width/2), y = dbident_ymin-0.1, xend = dbrrecscr_xmin+(box_width/2), yend = dbrrecscr_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbident_xmax+(0.1*label_width), y = dbident_ymin+(box_height2/2), xend = dbexcl_xmin-(0.1*label_width), yend = dbident_ymin+(box_height2/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrecscr_xmin+(box_width/2), y = dbrrecscr_ymin-0.1, xend = dbrrepsought_xmin+(box_width/2), yend = dbrrepsought_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrecscr_xmax+(0.1*label_width), y = dbrrecexcl_ymin+(box_height1/2), xend = dbrrecexcl_xmin-(0.1*label_width), yend = dbrrecexcl_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrepsought_xmin+(box_width/2), y = dbrrepsought_ymin-0.1, xend = dbrrep_xmin+(box_width/2), yend = dbrrep_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrepsought_xmax+(0.1*label_width), y = dbrrepsought_ymin+(box_height1/2), xend = dbrrepnotret_xmin-(0.1*label_width), yend = dbrrepsought_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrep_xmin+(box_width/2), y = dbrrep_ymin-0.1, xend = dbrrep_xmin+(box_width/2), yend = new_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrep_xmax+(0.1*label_width), y = dbrrep_ymin+(box_height1/2), xend = dbrrepexcl_xmin-(0.1*label_width), yend = dbrrep_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
#previous
geom_segment(aes(x = new_xmin+(box_width/2), y = new_ymin-0.1, xend = new_xmin+(box_width/2), yend = tot_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = prevdat_xmin+(box_width0/2), y = prevdat_ymin-0.1, xend = prevdat_xmin+(box_width0/2), yend = tot_ymin+(box_height2/2)), lineend = 'round', linejoin = 'round', colour = "gray40") +
geom_segment(aes(x = prevdat_xmin+(box_width0/2), y = tot_ymin+(box_height2/2), xend = tot_xmin-0.1, yend = tot_ymin+(box_height2/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
#other
geom_segment(aes(x = otherident_xmin+(box_width/2), y = otherident_ymin-0.1, xend = otherident_xmin+(box_width/2), yend = otherrepsought_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = otherrepsought_xmin+(box_width/2), y = otherrepsought_ymin-0.1, xend = otherrepsought_xmin+(box_width/2), yend = otherrep_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = otherrepsought_xmax+(0.1*label_width), y = otherrepsought_ymin+(box_height1/2), xend = otherrepnotret_xmin-(0.1*label_width), yend = otherrepsought_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = otherrep_xmax+(0.1*label_width), y = otherrep_ymin+(box_height1/2), xend = otherrepexcl_xmin-(0.1*label_width), yend = otherrep_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = otherrep_xmin+(box_width/2), y = otherrep_ymin-0.1, xend = otherrep_xmin+(box_width/2), yend = new_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', colour = "gray40") +
geom_segment(aes(x = otherrep_xmin+(box_width/2), y = new_ymin+(box_height1/2), xend = new_xmax+(0.1*label_width), yend = new_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
#previous
geom_rect(mapping=aes(xmin=prevdat_xmin, xmax=prevdat_xmax, ymin=prevdat_ymin, ymax=prevdat_ymax), color="#dcdcdc", fill='#dcdcdc') + #previous box
geom_rect(mapping=aes(xmin=prevdat_xmin, xmax=prevdat_xmax, ymin=prevdat_data_y1-0.2, ymax=prevdat_data_y1+0.2), color="gray95", fill='gray95') + #light background
geom_rect(mapping=aes(xmin=prevdat_xmin, xmax=prevdat_xmax, ymin=prevdat_data_y2-0.2, ymax=prevdat_data_y2+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=prevdat_lab_x1, y=prevdat_lab_y1, label=prevdat_lab1, color="black", size=font_size) + #previous label 1
annotate(geom="text", x=prevdat_lab_x2, y=prevdat_lab_y2, label=prevdat_lab2, color="black", size=font_size) + #previous label 2
annotate(geom="text", x=prevdat_data_x1, y=prevdat_data_y1, label=data$previous_studies, color="black", size=font_size) + #previous data
annotate(geom="text", x=prevdat_data_x2, y=prevdat_data_y2, label=data$previous_reports, color="black", size=font_size) + #previous data
#otherident
geom_rect(mapping=aes(xmin=otherident_xmin, xmax=otherident_xmax, ymin=otherident_ymin, ymax=otherident_ymax), color="#dcdcdc", fill='#dcdcdc') + #otherident box
annotate(geom="text", x=otherident_lab_x, y=otherident_lab_y, label=otherident_lab, color="black", size=font_size) + #otherident label
annotate(geom="text", x=otherident_lab_x1, y=otherident_lab_y1, label=otherident_lab1, color="black", size=font_size) + #otherident label 1
geom_rect(mapping=aes(xmin=otherident_xmin, xmax=otherident_xmax, ymin=otherident_data_y1-0.2, ymax=otherident_data_y1+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=otherident_xmin+col_mid_x, y=otherident_data_y1+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=otherident_xmin, xmax=otherident_xmax, ymin=otherident_data_y1-0.6, ymax=otherident_data_y1-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=otherident_xmin+col_mid_x, y=otherident_data_y1-0.4, label=as.character(data$other_ident_web), fontface=2, color="black", size=font_size-0.5) +
annotate(geom="text", x=otherident_lab_x2, y=otherident_lab_y2, label=otherident_lab2, color="black", size=font_size) + #otherident label 2
geom_rect(mapping=aes(xmin=otherident_xmin, xmax=otherident_xmax, ymin=otherident_data_y2-0.2, ymax=otherident_data_y2+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=otherident_xmin+col_mid_x, y=otherident_data_y2, label=as.character(data$other_ident_org), fontface=2, color="black", size=font_size-0.5) +
annotate(geom="text", x=otherident_lab_x3, y=otherident_lab_y3, label=otherident_lab3, color="black", size=font_size) + #otherident label 3
geom_rect(mapping=aes(xmin=otherident_xmin, xmax=otherident_xmax, ymin=otherident_data_y3-0.2, ymax=otherident_data_y3+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=otherident_xmin+col_mid_x, y=otherident_data_y3, label=as.character(data$other_ident_cit), fontface=2, color="black", size=font_size-0.5) +
#dbident
geom_rect(mapping=aes(xmin=dbident_xmin, xmax=dbident_xmax, ymin=dbident_ymin, ymax=dbident_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbident box
annotate(geom="text", x=dbident_lab_x, y=dbident_lab_y, label=dbident_lab, color="black", size=font_size) + #dbident label
annotate(geom="text", x=dbident_lab_x1, y=dbident_lab_y1, label=dbident_lab1, color="black", size=font_size) + #dbident label 1
annotate(geom="text", x=dbident_lab_x2, y=dbident_lab_y2, label=dbident_lab2, color="black", size=font_size) + #dbident label 2
geom_rect(mapping=aes(xmin=dbident_xmin, xmax=dbident_xmax, ymin=dbident_data_y1-0.2, ymax=dbident_data_y1+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbident_xmin+col_mid_x, y=dbident_data_y1+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbident_xmin, xmax=dbident_xmax, ymin=dbident_data_y1-0.6, ymax=dbident_data_y1-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbident_xmin+col_mid_x, y=dbident_data_y1-0.4, label=as.character(data$database_results), fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbident_xmin, xmax=dbident_xmax, ymin=dbident_data_y2-0.2, ymax=dbident_data_y2+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbident_xmin+col_mid_x, y=dbident_data_y2, label=as.character(data$register_results), fontface=2, color="black", size=font_size-0.5) +
#dbexcl
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_ymin, ymax=dbexcl_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbexcl box
annotate(geom="text", x=dbexcl_lab_x, y=dbexcl_lab_y, label=dbexcl_lab, color="black", size=font_size) + #dbexcl label
annotate(geom="text", x=dbexcl_lab_x1, y=dbexcl_lab_y1, label=dbexcl_lab1, color="black", size=font_size) + #dbexcl label 1
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_data_y1-0.2, ymax=dbexcl_data_y1+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbexcl_xmin+col_mid_x, y=dbexcl_data_y1+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_data_y1-0.6, ymax=dbexcl_data_y1-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbexcl_xmin+col_mid_x, y=dbexcl_data_y1-0.4, label=as.character(data$db_excl_dup), fontface=2, color="black", size=font_size-0.5) +
annotate(geom="text", x=dbexcl_lab_x2, y=dbexcl_lab_y2, label=dbexcl_lab2, color="black", size=font_size) + #dbexcl label 2
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_data_y2-0.2, ymax=dbexcl_data_y2+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbexcl_xmin+col_mid_x, y=dbexcl_data_y2, label=as.character(data$db_excl_aut), fontface=2, color="black", size=font_size-0.5) +
annotate(geom="text", x=dbexcl_lab_x3, y=dbexcl_lab_y3, label=dbexcl_lab3, color="black", size=font_size) + #dbexcl label 3
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_data_y3-0.2, ymax=dbexcl_data_y3+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbexcl_xmin+col_mid_x, y=dbexcl_data_y3, label=as.character(data$db_excl_oth), fontface=2, color="black", size=font_size-0.5) +
#dbrrecscr
geom_rect(mapping=aes(xmin=dbrrecscr_xmin, xmax=dbrrecscr_xmax, ymin=dbrrecscr_ymin, ymax=dbrrecscr_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrecscr box
annotate(geom="text", x=dbrrecscr_lab_x, y=dbrrecscr_lab_y, label=dbrrecscr_lab, color="black", size=font_size) + #dbrrecscr label
geom_rect(mapping=aes(xmin=dbrrecscr_xmin, xmax=dbrrecscr_xmax, ymin=dbrrecscr_data_y-0.2, ymax=dbrrecscr_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrecscr_xmin+col_mid_x, y=dbrrecscr_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrecscr_xmin, xmax=dbrrecscr_xmax, ymin=dbrrecscr_data_y-0.6, ymax=dbrrecscr_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrecscr_xmin+col_mid_x, y=dbrrecscr_data_y-0.4, label=as.character(data$records_screened), fontface=2, color="black", size=font_size-0.5) +
#dbrrecexcl
geom_rect(mapping=aes(xmin=dbrrecexcl_xmin, xmax=dbrrecexcl_xmax, ymin=dbrrecexcl_ymin, ymax=dbrrecexcl_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrecexcl box
annotate(geom="text", x=dbrrecexcl_lab_x, y=dbrrecexcl_lab_y, label=dbrrecexcl_lab, color="black", size=font_size) + #dbrrecexcl label
geom_rect(mapping=aes(xmin=dbrrecexcl_xmin, xmax=dbrrecexcl_xmax, ymin=dbrrecexcl_data_y-0.2, ymax=dbrrecexcl_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrecexcl_xmin+col_mid_x, y=dbrrecexcl_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrecexcl_xmin, xmax=dbrrecexcl_xmax, ymin=dbrrecexcl_data_y-0.6, ymax=dbrrecexcl_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrecexcl_xmin+col_mid_x, y=dbrrecexcl_data_y-0.4, label=as.character(data$records_excluded), fontface=2, color="black", size=font_size-0.5) +
#otherrepsought
geom_rect(mapping=aes(xmin=otherrepsought_xmin, xmax=otherrepsought_xmax, ymin=otherrepsought_ymin, ymax=otherrepsought_ymax), color="#dcdcdc", fill='#dcdcdc') + #otherrepsought box
annotate(geom="text", x=otherrepsought_lab_x, y=otherrepsought_lab_y, label=otherrepsought_lab, color="black", size=font_size) + #otherrepsought label
geom_rect(mapping=aes(xmin=otherrepsought_xmin, xmax=otherrepsought_xmax, ymin=otherrepsought_data_y-0.2, ymax=otherrepsought_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=otherrepsought_xmin+col_mid_x, y=otherrepsought_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=otherrepsought_xmin, xmax=otherrepsought_xmax, ymin=otherrepsought_data_y-0.6, ymax=otherrepsought_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=otherrepsought_xmin+col_mid_x, y=otherrepsought_data_y-0.4, label=as.character(data$other_sought_reports), fontface=2, color="black", size=font_size-0.5) +
#otherrepnotret
geom_rect(mapping=aes(xmin=otherrepnotret_xmin, xmax=otherrepnotret_xmax, ymin=otherrepnotret_ymin, ymax=otherrepnotret_ymax), color="#dcdcdc", fill='#dcdcdc') + #otherrepnotret box
annotate(geom="text", x=otherrepnotret_lab_x, y=otherrepnotret_lab_y, label=otherrepnotret_lab, color="black", size=font_size) + #otherrepnotret label
geom_rect(mapping=aes(xmin=otherrepnotret_xmin, xmax=otherrepnotret_xmax, ymin=otherrepnotret_data_y-0.2, ymax=otherrepnotret_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=otherrepnotret_xmin+col_mid_x, y=otherrepnotret_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=otherrepnotret_xmin, xmax=otherrepnotret_xmax, ymin=otherrepnotret_data_y-0.6, ymax=otherrepnotret_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=otherrepnotret_xmin+col_mid_x, y=otherrepnotret_data_y-0.4, label=as.character(data$other_notretrieved_reports), fontface=2, color="black", size=font_size-0.5) +
#dbrrepsought
geom_rect(mapping=aes(xmin=dbrrepsought_xmin, xmax=dbrrepsought_xmax, ymin=dbrrepsought_ymin, ymax=dbrrepsought_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrepsought box
annotate(geom="text", x=dbrrepsought_lab_x, y=dbrrepsought_lab_y, label=dbrrepsought_lab, color="black", size=font_size) + #dbrrepsought label
geom_rect(mapping=aes(xmin=dbrrepsought_xmin, xmax=dbrrepsought_xmax, ymin=dbrrepsought_data_y-0.2, ymax=dbrrepsought_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrepsought_xmin+col_mid_x, y=dbrrepsought_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrepsought_xmin, xmax=dbrrepsought_xmax, ymin=dbrrepsought_data_y-0.6, ymax=dbrrepsought_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrepsought_xmin+col_mid_x, y=dbrrepsought_data_y-0.4, label=as.character(data$dbr_sought_reports), fontface=2, color="black", size=font_size-0.5) +
#dbrrepnotret
geom_rect(mapping=aes(xmin=dbrrepnotret_xmin, xmax=dbrrepnotret_xmax, ymin=dbrrepnotret_ymin, ymax=dbrrepnotret_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrepnotret box
annotate(geom="text", x=dbrrepnotret_lab_x, y=dbrrepnotret_lab_y, label=dbrrepnotret_lab, color="black", size=font_size) + #dbrrepnotret label
geom_rect(mapping=aes(xmin=dbrrepnotret_xmin, xmax=dbrrepnotret_xmax, ymin=dbrrepnotret_data_y-0.2, ymax=dbrrepnotret_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrepnotret_xmin+col_mid_x, y=dbrrepnotret_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrepnotret_xmin, xmax=dbrrepnotret_xmax, ymin=dbrrepnotret_data_y-0.6, ymax=dbrrepnotret_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrepnotret_xmin+col_mid_x, y=dbrrepnotret_data_y-0.4, label=as.character(data$dbr_notretrieved_reports), fontface=2, color="black", size=font_size-0.5) +
#otherrep
geom_rect(mapping=aes(xmin=otherrep_xmin, xmax=otherrep_xmax, ymin=otherrep_ymin, ymax=otherrep_ymax), color="#dcdcdc", fill='#dcdcdc') + #otherrep box
annotate(geom="text", x=otherrep_lab_x, y=otherrep_lab_y, label=otherrep_lab, color="black", size=font_size) + #otherrep label
geom_rect(mapping=aes(xmin=otherrep_xmin, xmax=otherrep_xmax, ymin=otherrep_data_y-0.2, ymax=otherrep_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=otherrep_xmin+col_mid_x, y=otherrep_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=otherrep_xmin, xmax=otherrep_xmax, ymin=otherrep_data_y-0.6, ymax=otherrep_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=otherrep_xmin+col_mid_x, y=otherrep_data_y-0.4, label=as.character(data$other_assessed), fontface=2, color="black", size=font_size-0.5) +
#otherrepexcl
geom_rect(mapping=aes(xmin=otherrepexcl_xmin, xmax=otherrepexcl_xmax, ymin=otherrepexcl_ymin, ymax=otherrepexcl_ymax), color="#dcdcdc", fill='#dcdcdc') + #otherrepexcl box
annotate(geom="text", x=otherrepexcl_lab_x, y=otherrepexcl_lab_y, label=otherrepexcl_lab, color="black", size=font_size) + #otherrepexcl label
geom_rect(mapping=aes(xmin=otherrepexcl_xmin, xmax=otherrepexcl_xmax, ymin=otherrepexcl_data_y-0.2, ymax=otherrepexcl_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=otherrepexcl_xmin+col_mid_x, y=otherrepexcl_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=otherrepexcl_xmin, xmax=otherrepexcl_xmax, ymin=otherrepexcl_data_y-0.6, ymax=otherrepexcl_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=otherrepexcl_xmin+col_mid_x, y=otherrepexcl_data_y-0.4, label=as.character(data$other_excluded_data), fontface=2, color="black", size=font_size-0.5) +
annotate(geom="text", x=otherrepexcl_lab_x, y=otherrepexclreasons_lab_y, label=data$other_excluded, color="black", size=font_size-0.25, vjust=1) + #otherrepexcl reasons
#dbrrep
geom_rect(mapping=aes(xmin=dbrrep_xmin, xmax=dbrrep_xmax, ymin=dbrrep_ymin, ymax=dbrrep_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrep box
annotate(geom="text", x=dbrrep_lab_x, y=dbrrep_lab_y, label=dbrrep_lab, color="black", size=font_size) + #dbrrep label
geom_rect(mapping=aes(xmin=dbrrep_xmin, xmax=dbrrep_xmax, ymin=dbrrep_data_y-0.2, ymax=dbrrep_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrep_xmin+col_mid_x, y=dbrrep_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrep_xmin, xmax=dbrrep_xmax, ymin=dbrrep_data_y-0.6, ymax=dbrrep_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrep_xmin+col_mid_x, y=dbrrep_data_y-0.4, label=as.character(data$dbr_assessed), fontface=2, color="black", size=font_size-0.5) +
#dbrrepexcl
geom_rect(mapping=aes(xmin=dbrrepexcl_xmin, xmax=dbrrepexcl_xmax, ymin=dbrrepexcl_ymin, ymax=dbrrepexcl_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrepexcl box
annotate(geom="text", x=dbrrepexcl_lab_x, y=dbrrepexcl_lab_y, label=dbrrepexcl_lab, color="black", size=font_size) + #dbrrepexcl label
geom_rect(mapping=aes(xmin=dbrrepexcl_xmin, xmax=dbrrepexcl_xmax, ymin=dbrrepexcl_data_y-0.2, ymax=dbrrepexcl_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrepexcl_xmin+col_mid_x, y=dbrrepexcl_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrepexcl_xmin, xmax=dbrrepexcl_xmax, ymin=dbrrepexcl_data_y-0.6, ymax=dbrrepexcl_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrepexcl_xmin+col_mid_x, y=dbrrepexcl_data_y-0.4, label=as.character(data$dbr_excluded_data), fontface=2, color="black", size=font_size-0.5) +
annotate(geom="text", x=dbrrepexcl_lab_x, y=dbrrepexclreasons_lab_y, label=data$dbr_excluded, color="black", size=font_size-0.5, vjust=1) + #dbrrepexcl reasons
#new
geom_rect(mapping=aes(xmin=new_xmin, xmax=new_xmax, ymin=new_ymin, ymax=new_ymax), color="#dcdcdc", fill='#dcdcdc') + #new box
annotate(geom="text", x=new_lab_x1, y=new_lab_y1, label=new_lab1, color="black", size=font_size) + #new label 1
annotate(geom="text", x=new_lab_x1, y=new_lab_y2, label=new_lab2, color="black", size=font_size) + #new label 2
geom_rect(mapping=aes(xmin=new_xmin, xmax=new_xmax, ymin=new_data_y1-0.2, ymax=new_data_y1+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=new_xmin+col_mid_x, y=new_data_y1+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=new_xmin, xmax=new_xmax, ymin=new_data_y1-0.6, ymax=new_data_y1-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=new_xmin+col_mid_x, y=new_data_y1-0.4, label=as.character(data$new_studies), fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=new_xmin, xmax=new_xmax, ymin=new_data_y2-0.2, ymax=new_data_y2+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=new_xmin+col_mid_x, y=new_data_y2, label=as.character(data$new_reports), fontface=2, color="black", size=font_size-0.5) +
#total
geom_rect(mapping=aes(xmin=tot_xmin, xmax=tot_xmax, ymin=tot_ymin, ymax=tot_ymax), color="#dcdcdc", fill='#dcdcdc') + #total box
annotate(geom="text", x=tot_lab_x1, y=tot_lab_y1, label=tot_lab1, color="black", size=font_size) + #total label 1
annotate(geom="text", x=tot_lab_x1, y=tot_lab_y2, label=tot_lab2, color="black", size=font_size) + #total label 2
geom_rect(mapping=aes(xmin=tot_xmin, xmax=tot_xmax, ymin=tot_data_y1-0.2, ymax=tot_data_y1+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=tot_xmin+col_mid_x, y=tot_data_y1+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=tot_xmin, xmax=tot_xmax, ymin=tot_data_y1-0.6, ymax=tot_data_y1-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=tot_xmin+col_mid_x, y=tot_data_y1-0.4, label=as.character(data$total_studies), fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=tot_xmin, xmax=tot_xmax, ymin=tot_data_y2-0.2, ymax=tot_data_y2+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=tot_xmin+col_mid_x, y=tot_data_y2, label=as.character(data$total_reports), fontface=2, color="black", size=font_size-0.5)
} else {
#Exclude 'other' arm
#Generate plot
canvas <- ggplot(df, aes(x = x, y = y)) +
ggpubr::theme_transparent(base_size = 12, base_family = "") +
scale_x_continuous(name="x") +
scale_y_continuous(name="y")
plot <- canvas +
geom_rrect(mapping=aes(xmin=ident_xmin, xmax=ident_xmax, ymin=ident_ymin, ymax=ident_ymax), color="#bcd1ee", fill="#bcd1ee") + #identification box
geom_rrect(mapping=aes(xmin=screen_xmin, xmax=screen_xmax, ymin=screen_ymin, ymax=screen_ymax), color="#bcd1ee", fill="#bcd1ee") + #screening box
geom_rrect(mapping=aes(xmin=incl_xmin, xmax=incl_xmax, ymin=incl_ymin, ymax=incl_ymax), color="#bcd1ee", fill="#bcd1ee") + #included box
geom_rrect(mapping=aes(xmin=prev_xmin, xmax=prev_xmax, ymin=prev_ymin, ymax=prev_ymax), color="#dcdcdc", fill="#dcdcdc") + #previous box
geom_rrect(mapping=aes(xmin=dbr_xmin, xmax=dbr_xmax, ymin=dbr_ymin, ymax=dbr_ymax), color="#ffc125", fill="#ffc125") + #dbr box
annotate(geom="text", x=ident_lab_x, y=ident_lab_y, label=ident_lab, color="black", size=font_size, angle = 90) +
annotate(geom="text", x=screen_lab_x, y=screen_lab_y, label=screen_lab, color="black", size=font_size, angle = 90) +
annotate(geom="text", x=incl_lab_x, y=incl_lab_y, label=incl_lab, color="black", size=font_size, angle = 90) +
annotate(geom="text", x=prev_lab_x, y=prev_lab_y, label=prev_lab, color="black", size=font_size) +
annotate(geom="text", x=dbr_lab_x, y=dbr_lab_y, label=dbr_lab, color="black", size=font_size) +
#arrows
geom_segment(aes(x = dbident_xmin+(box_width/2), y = dbident_ymin-0.1, xend = dbrrecscr_xmin+(box_width/2), yend = dbrrecscr_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbident_xmax+(0.1*label_width), y = dbident_ymin+(box_height2/2), xend = dbexcl_xmin-(0.1*label_width), yend = dbident_ymin+(box_height2/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrecscr_xmin+(box_width/2), y = dbrrecscr_ymin-0.1, xend = dbrrepsought_xmin+(box_width/2), yend = dbrrepsought_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrecscr_xmax+(0.1*label_width), y = dbrrecexcl_ymin+(box_height1/2), xend = dbrrecexcl_xmin-(0.1*label_width), yend = dbrrecexcl_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrepsought_xmin+(box_width/2), y = dbrrepsought_ymin-0.1, xend = dbrrep_xmin+(box_width/2), yend = dbrrep_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrepsought_xmax+(0.1*label_width), y = dbrrepsought_ymin+(box_height1/2), xend = dbrrepnotret_xmin-(0.1*label_width), yend = dbrrepsought_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrep_xmin+(box_width/2), y = dbrrep_ymin-0.1, xend = dbrrep_xmin+(box_width/2), yend = new_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrep_xmax+(0.1*label_width), y = dbrrep_ymin+(box_height1/2), xend = dbrrepexcl_xmin-(0.1*label_width), yend = dbrrep_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
#previous
geom_segment(aes(x = new_xmin+(box_width/2), y = new_ymin-0.1, xend = new_xmin+(box_width/2), yend = tot_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = prevdat_xmin+(box_width0/2), y = prevdat_ymin-0.1, xend = prevdat_xmin+(box_width0/2), yend = tot_ymin+(box_height2/2)), lineend = 'round', linejoin = 'round', colour = "gray40") +
geom_segment(aes(x = prevdat_xmin+(box_width0/2), y = tot_ymin+(box_height2/2), xend = tot_xmin-0.1, yend = tot_ymin+(box_height2/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
#previous
geom_rect(mapping=aes(xmin=prevdat_xmin, xmax=prevdat_xmax, ymin=prevdat_ymin, ymax=prevdat_ymax), color="#dcdcdc", fill='#dcdcdc') + #previous box
geom_rect(mapping=aes(xmin=prevdat_xmin, xmax=prevdat_xmax, ymin=prevdat_data_y1-0.2, ymax=prevdat_data_y1+0.2), color="gray95", fill='gray95') + #light background
geom_rect(mapping=aes(xmin=prevdat_xmin, xmax=prevdat_xmax, ymin=prevdat_data_y2-0.2, ymax=prevdat_data_y2+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=prevdat_lab_x1, y=prevdat_lab_y1, label=prevdat_lab1, color="black", size=font_size) + #previous label 1
annotate(geom="text", x=prevdat_lab_x2, y=prevdat_lab_y2, label=prevdat_lab2, color="black", size=font_size) + #previous label 2
annotate(geom="text", x=prevdat_data_x1, y=prevdat_data_y1, label=data$previous_studies, color="black", size=font_size) + #previous data
annotate(geom="text", x=prevdat_data_x2, y=prevdat_data_y2, label=data$previous_reports, color="black", size=font_size) + #previous data
#dbident
geom_rect(mapping=aes(xmin=dbident_xmin, xmax=dbident_xmax, ymin=dbident_ymin, ymax=dbident_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbident box
annotate(geom="text", x=dbident_lab_x, y=dbident_lab_y, label=dbident_lab, color="black", size=font_size) + #dbident label
annotate(geom="text", x=dbident_lab_x1, y=dbident_lab_y1, label=dbident_lab1, color="black", size=font_size) + #dbident label 1
annotate(geom="text", x=dbident_lab_x2, y=dbident_lab_y2, label=dbident_lab2, color="black", size=font_size) + #dbident label 2
geom_rect(mapping=aes(xmin=dbident_xmin, xmax=dbident_xmax, ymin=dbident_data_y1-0.2, ymax=dbident_data_y1+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbident_xmin+col_mid_x, y=dbident_data_y1+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbident_xmin, xmax=dbident_xmax, ymin=dbident_data_y1-0.6, ymax=dbident_data_y1-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbident_xmin+col_mid_x, y=dbident_data_y1-0.4, label=as.character(data$database_results), fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbident_xmin, xmax=dbident_xmax, ymin=dbident_data_y2-0.2, ymax=dbident_data_y2+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbident_xmin+col_mid_x, y=dbident_data_y2, label=as.character(data$register_results), fontface=2, color="black", size=font_size-0.5) +
#dbexcl
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_ymin, ymax=dbexcl_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbexcl box
annotate(geom="text", x=dbexcl_lab_x, y=dbexcl_lab_y, label=dbexcl_lab, color="black", size=font_size) + #dbexcl label
annotate(geom="text", x=dbexcl_lab_x1, y=dbexcl_lab_y1, label=dbexcl_lab1, color="black", size=font_size) + #dbexcl label 1
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_data_y1-0.2, ymax=dbexcl_data_y1+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbexcl_xmin+col_mid_x, y=dbexcl_data_y1+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_data_y1-0.6, ymax=dbexcl_data_y1-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbexcl_xmin+col_mid_x, y=dbexcl_data_y1-0.4, label=as.character(data$db_excl_dup), fontface=2, color="black", size=font_size-0.5) +
annotate(geom="text", x=dbexcl_lab_x2, y=dbexcl_lab_y2, label=dbexcl_lab2, color="black", size=font_size) + #dbexcl label 2
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_data_y2-0.2, ymax=dbexcl_data_y2+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbexcl_xmin+col_mid_x, y=dbexcl_data_y2, label=as.character(data$db_excl_aut), fontface=2, color="black", size=font_size-0.5) +
annotate(geom="text", x=dbexcl_lab_x3, y=dbexcl_lab_y3, label=dbexcl_lab3, color="black", size=font_size) + #dbexcl label 3
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_data_y3-0.2, ymax=dbexcl_data_y3+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbexcl_xmin+col_mid_x, y=dbexcl_data_y3, label=as.character(data$db_excl_oth), fontface=2, color="black", size=font_size-0.5) +
#dbrrecscr
geom_rect(mapping=aes(xmin=dbrrecscr_xmin, xmax=dbrrecscr_xmax, ymin=dbrrecscr_ymin, ymax=dbrrecscr_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrecscr box
annotate(geom="text", x=dbrrecscr_lab_x, y=dbrrecscr_lab_y, label=dbrrecscr_lab, color="black", size=font_size) + #dbrrecscr label
geom_rect(mapping=aes(xmin=dbrrecscr_xmin, xmax=dbrrecscr_xmax, ymin=dbrrecscr_data_y-0.2, ymax=dbrrecscr_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrecscr_xmin+col_mid_x, y=dbrrecscr_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrecscr_xmin, xmax=dbrrecscr_xmax, ymin=dbrrecscr_data_y-0.6, ymax=dbrrecscr_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrecscr_xmin+col_mid_x, y=dbrrecscr_data_y-0.4, label=as.character(data$records_screened), fontface=2, color="black", size=font_size-0.5) +
#dbrrecexcl
geom_rect(mapping=aes(xmin=dbrrecexcl_xmin, xmax=dbrrecexcl_xmax, ymin=dbrrecexcl_ymin, ymax=dbrrecexcl_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrecexcl box
annotate(geom="text", x=dbrrecexcl_lab_x, y=dbrrecexcl_lab_y, label=dbrrecexcl_lab, color="black", size=font_size) + #dbrrecexcl label
geom_rect(mapping=aes(xmin=dbrrecexcl_xmin, xmax=dbrrecexcl_xmax, ymin=dbrrecexcl_data_y-0.2, ymax=dbrrecexcl_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrecexcl_xmin+col_mid_x, y=dbrrecexcl_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrecexcl_xmin, xmax=dbrrecexcl_xmax, ymin=dbrrecexcl_data_y-0.6, ymax=dbrrecexcl_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrecexcl_xmin+col_mid_x, y=dbrrecexcl_data_y-0.4, label=as.character(data$records_excluded), fontface=2, color="black", size=font_size-0.5) +
#dbrrepsought
geom_rect(mapping=aes(xmin=dbrrepsought_xmin, xmax=dbrrepsought_xmax, ymin=dbrrepsought_ymin, ymax=dbrrepsought_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrepsought box
annotate(geom="text", x=dbrrepsought_lab_x, y=dbrrepsought_lab_y, label=dbrrepsought_lab, color="black", size=font_size) + #dbrrepsought label
geom_rect(mapping=aes(xmin=dbrrepsought_xmin, xmax=dbrrepsought_xmax, ymin=dbrrepsought_data_y-0.2, ymax=dbrrepsought_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrepsought_xmin+col_mid_x, y=dbrrepsought_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrepsought_xmin, xmax=dbrrepsought_xmax, ymin=dbrrepsought_data_y-0.6, ymax=dbrrepsought_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrepsought_xmin+col_mid_x, y=dbrrepsought_data_y-0.4, label=as.character(data$dbr_sought_reports), fontface=2, color="black", size=font_size-0.5) +
#dbrrepnotret
geom_rect(mapping=aes(xmin=dbrrepnotret_xmin, xmax=dbrrepnotret_xmax, ymin=dbrrepnotret_ymin, ymax=dbrrepnotret_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrepnotret box
annotate(geom="text", x=dbrrepnotret_lab_x, y=dbrrepnotret_lab_y, label=dbrrepnotret_lab, color="black", size=font_size) + #dbrrepnotret label
geom_rect(mapping=aes(xmin=dbrrepnotret_xmin, xmax=dbrrepnotret_xmax, ymin=dbrrepnotret_data_y-0.2, ymax=dbrrepnotret_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrepnotret_xmin+col_mid_x, y=dbrrepnotret_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrepnotret_xmin, xmax=dbrrepnotret_xmax, ymin=dbrrepnotret_data_y-0.6, ymax=dbrrepnotret_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrepnotret_xmin+col_mid_x, y=dbrrepnotret_data_y-0.4, label=as.character(data$dbr_notretrieved_reports), fontface=2, color="black", size=font_size-0.5) +
#dbrrep
geom_rect(mapping=aes(xmin=dbrrep_xmin, xmax=dbrrep_xmax, ymin=dbrrep_ymin, ymax=dbrrep_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrep box
annotate(geom="text", x=dbrrep_lab_x, y=dbrrep_lab_y, label=dbrrep_lab, color="black", size=font_size) + #dbrrep label
geom_rect(mapping=aes(xmin=dbrrep_xmin, xmax=dbrrep_xmax, ymin=dbrrep_data_y-0.2, ymax=dbrrep_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrep_xmin+col_mid_x, y=dbrrep_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrep_xmin, xmax=dbrrep_xmax, ymin=dbrrep_data_y-0.6, ymax=dbrrep_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrep_xmin+col_mid_x, y=dbrrep_data_y-0.4, label=as.character(data$dbr_assessed), fontface=2, color="black", size=font_size-0.5) +
#dbrrepexcl
geom_rect(mapping=aes(xmin=dbrrepexcl_xmin, xmax=dbrrepexcl_xmax, ymin=dbrrepexcl_ymin, ymax=dbrrepexcl_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrepexcl box
annotate(geom="text", x=dbrrepexcl_lab_x, y=dbrrepexcl_lab_y, label=dbrrepexcl_lab, color="black", size=font_size) + #dbrrepexcl label
geom_rect(mapping=aes(xmin=dbrrepexcl_xmin, xmax=dbrrepexcl_xmax, ymin=dbrrepexcl_data_y-0.2, ymax=dbrrepexcl_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrepexcl_xmin+col_mid_x, y=dbrrepexcl_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrepexcl_xmin, xmax=dbrrepexcl_xmax, ymin=dbrrepexcl_data_y-0.6, ymax=dbrrepexcl_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrepexcl_xmin+col_mid_x, y=dbrrepexcl_data_y-0.4, label=as.character(data$dbr_excluded_data), fontface=2, color="black", size=font_size-0.5) +
annotate(geom="text", x=dbrrepexcl_lab_x, y=dbrrepexclreasons_lab_y, label=data$dbr_excluded, color="black", size=font_size-0.25, vjust=1) + #dbrrepexcl reasons
#new
geom_rect(mapping=aes(xmin=new_xmin, xmax=new_xmax, ymin=new_ymin, ymax=new_ymax), color="#dcdcdc", fill='#dcdcdc') + #new box
annotate(geom="text", x=new_lab_x1, y=new_lab_y1, label=new_lab1, color="black", size=font_size) + #new label 1
annotate(geom="text", x=new_lab_x1, y=new_lab_y2, label=new_lab2, color="black", size=font_size) + #new label 2
geom_rect(mapping=aes(xmin=new_xmin, xmax=new_xmax, ymin=new_data_y1-0.2, ymax=new_data_y1+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=new_xmin+col_mid_x, y=new_data_y1+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=new_xmin, xmax=new_xmax, ymin=new_data_y1-0.6, ymax=new_data_y1-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=new_xmin+col_mid_x, y=new_data_y1-0.4, label=as.character(data$new_studies), fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=new_xmin, xmax=new_xmax, ymin=new_data_y2-0.2, ymax=new_data_y2+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=new_xmin+col_mid_x, y=new_data_y2, label=as.character(data$new_reports), fontface=2, color="black", size=font_size-0.5) +
#total
geom_rect(mapping=aes(xmin=tot_xmin, xmax=tot_xmax, ymin=tot_ymin, ymax=tot_ymax), color="#dcdcdc", fill='#dcdcdc') + #total box
annotate(geom="text", x=tot_lab_x1, y=tot_lab_y1, label=tot_lab1, color="black", size=font_size) + #total label 1
annotate(geom="text", x=tot_lab_x1, y=tot_lab_y2, label=tot_lab2, color="black", size=font_size) + #total label 2
geom_rect(mapping=aes(xmin=tot_xmin, xmax=tot_xmax, ymin=tot_data_y1-0.2, ymax=tot_data_y1+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=tot_xmin+col_mid_x, y=tot_data_y1+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=tot_xmin, xmax=tot_xmax, ymin=tot_data_y1-0.6, ymax=tot_data_y1-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=tot_xmin+col_mid_x, y=tot_data_y1-0.4, label=as.character(data$total_studies), fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=tot_xmin, xmax=tot_xmax, ymin=tot_data_y2-0.2, ymax=tot_data_y2+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=tot_xmin+col_mid_x, y=tot_data_y2, label=as.character(data$total_reports), fontface=2, color="black", size=font_size-0.5)
}
} else {
if (other == TRUE){
#Generate plot
canvas <- ggplot(df, aes(x = x, y = y)) +
ggpubr::theme_transparent(base_size = 12, base_family = "") +
scale_x_continuous(name="x") +
scale_y_continuous(name="y")
plot <- canvas +
geom_rrect(mapping=aes(xmin=ident_xmin, xmax=ident_xmax, ymin=ident_ymin, ymax=ident_ymax), color="#bcd1ee", fill="#bcd1ee") + #identification box
geom_rrect(mapping=aes(xmin=screen_xmin, xmax=screen_xmax, ymin=screen_ymin, ymax=screen_ymax), color="#bcd1ee", fill="#bcd1ee") + #screening box
geom_rrect(mapping=aes(xmin=incl_xmin, xmax=incl_xmax, ymin=incl_ymin, ymax=incl_ymax), color="#bcd1ee", fill="#bcd1ee") + #included box
geom_rrect(mapping=aes(xmin=dbr_xmin, xmax=dbr_xmax, ymin=dbr_ymin, ymax=dbr_ymax), color="#ffc125", fill="#ffc125") + #dbr box
geom_rrect(mapping=aes(xmin=other_xmin, xmax=other_xmax, ymin=other_ymin, ymax=other_ymax), color="#dcdcdc", fill="#dcdcdc") + #other box
annotate(geom="text", x=ident_lab_x, y=ident_lab_y, label=ident_lab, color="black", size=font_size, angle = 90) +
annotate(geom="text", x=screen_lab_x, y=screen_lab_y, label=screen_lab, color="black", size=font_size, angle = 90) +
annotate(geom="text", x=incl_lab_x, y=incl_lab_y, label=incl_lab, color="black", size=font_size, angle = 90) +
annotate(geom="text", x=dbr_lab_x, y=dbr_lab_y, label=dbr_lab, color="black", size=font_size) +
annotate(geom="text", x=other_lab_x, y=other_lab_y, label=other_lab, color="black", size=font_size) +
#arrows
geom_segment(aes(x = dbident_xmin+(box_width/2), y = dbident_ymin-0.1, xend = dbrrecscr_xmin+(box_width/2), yend = dbrrecscr_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbident_xmax+(0.1*label_width), y = dbident_ymin+(box_height2/2), xend = dbexcl_xmin-(0.1*label_width), yend = dbident_ymin+(box_height2/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrecscr_xmin+(box_width/2), y = dbrrecscr_ymin-0.1, xend = dbrrepsought_xmin+(box_width/2), yend = dbrrepsought_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrecscr_xmax+(0.1*label_width), y = dbrrecexcl_ymin+(box_height1/2), xend = dbrrecexcl_xmin-(0.1*label_width), yend = dbrrecexcl_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrepsought_xmin+(box_width/2), y = dbrrepsought_ymin-0.1, xend = dbrrep_xmin+(box_width/2), yend = dbrrep_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrepsought_xmax+(0.1*label_width), y = dbrrepsought_ymin+(box_height1/2), xend = dbrrepnotret_xmin-(0.1*label_width), yend = dbrrepsought_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrep_xmin+(box_width/2), y = dbrrep_ymin-0.1, xend = dbrrep_xmin+(box_width/2), yend = new_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrep_xmax+(0.1*label_width), y = dbrrep_ymin+(box_height1/2), xend = dbrrepexcl_xmin-(0.1*label_width), yend = dbrrep_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
#other
geom_segment(aes(x = otherident_xmin+(box_width/2), y = otherident_ymin-0.1, xend = otherident_xmin+(box_width/2), yend = otherrepsought_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = otherrepsought_xmin+(box_width/2), y = otherrepsought_ymin-0.1, xend = otherrepsought_xmin+(box_width/2), yend = otherrep_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = otherrepsought_xmax+(0.1*label_width), y = otherrepsought_ymin+(box_height1/2), xend = otherrepnotret_xmin-(0.1*label_width), yend = otherrepsought_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = otherrep_xmax+(0.1*label_width), y = otherrep_ymin+(box_height1/2), xend = otherrepexcl_xmin-(0.1*label_width), yend = otherrep_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = otherrep_xmin+(box_width/2), y = otherrep_ymin-0.1, xend = otherrep_xmin+(box_width/2), yend = new_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', colour = "gray40") +
geom_segment(aes(x = otherrep_xmin+(box_width/2), y = new_ymin+(box_height1/2), xend = new_xmax+(0.1*label_width), yend = new_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
#otherident
geom_rect(mapping=aes(xmin=otherident_xmin, xmax=otherident_xmax, ymin=otherident_ymin, ymax=otherident_ymax), color="#dcdcdc", fill='#dcdcdc') + #otherident box
annotate(geom="text", x=otherident_lab_x, y=otherident_lab_y, label=otherident_lab, color="black", size=font_size) + #otherident label
annotate(geom="text", x=otherident_lab_x1, y=otherident_lab_y1, label=otherident_lab1, color="black", size=font_size) + #otherident label 1
geom_rect(mapping=aes(xmin=otherident_xmin, xmax=otherident_xmax, ymin=otherident_data_y1-0.2, ymax=otherident_data_y1+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=otherident_xmin+col_mid_x, y=otherident_data_y1+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=otherident_xmin, xmax=otherident_xmax, ymin=otherident_data_y1-0.6, ymax=otherident_data_y1-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=otherident_xmin+col_mid_x, y=otherident_data_y1-0.4, label=as.character(data$other_ident_web), fontface=2, color="black", size=font_size-0.5) +
annotate(geom="text", x=otherident_lab_x2, y=otherident_lab_y2, label=otherident_lab2, color="black", size=font_size) + #otherident label 2
geom_rect(mapping=aes(xmin=otherident_xmin, xmax=otherident_xmax, ymin=otherident_data_y2-0.2, ymax=otherident_data_y2+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=otherident_xmin+col_mid_x, y=otherident_data_y2, label=as.character(data$other_ident_org), fontface=2, color="black", size=font_size-0.5) +
annotate(geom="text", x=otherident_lab_x3, y=otherident_lab_y3, label=otherident_lab3, color="black", size=font_size) + #otherident label 3
geom_rect(mapping=aes(xmin=otherident_xmin, xmax=otherident_xmax, ymin=otherident_data_y3-0.2, ymax=otherident_data_y3+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=otherident_xmin+col_mid_x, y=otherident_data_y3, label=as.character(data$other_ident_cit), fontface=2, color="black", size=font_size-0.5) +
#dbident
geom_rect(mapping=aes(xmin=dbident_xmin, xmax=dbident_xmax, ymin=dbident_ymin, ymax=dbident_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbident box
annotate(geom="text", x=dbident_lab_x, y=dbident_lab_y, label=dbident_lab, color="black", size=font_size) + #dbident label
annotate(geom="text", x=dbident_lab_x1, y=dbident_lab_y1, label=dbident_lab1, color="black", size=font_size) + #dbident label 1
annotate(geom="text", x=dbident_lab_x2, y=dbident_lab_y2, label=dbident_lab2, color="black", size=font_size) + #dbident label 2
geom_rect(mapping=aes(xmin=dbident_xmin, xmax=dbident_xmax, ymin=dbident_data_y1-0.2, ymax=dbident_data_y1+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbident_xmin+col_mid_x, y=dbident_data_y1+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbident_xmin, xmax=dbident_xmax, ymin=dbident_data_y1-0.6, ymax=dbident_data_y1-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbident_xmin+col_mid_x, y=dbident_data_y1-0.4, label=as.character(data$database_results), fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbident_xmin, xmax=dbident_xmax, ymin=dbident_data_y2-0.2, ymax=dbident_data_y2+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbident_xmin+col_mid_x, y=dbident_data_y2, label=as.character(data$register_results), fontface=2, color="black", size=font_size-0.5) +
#dbexcl
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_ymin, ymax=dbexcl_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbexcl box
annotate(geom="text", x=dbexcl_lab_x, y=dbexcl_lab_y, label=dbexcl_lab, color="black", size=font_size) + #dbexcl label
annotate(geom="text", x=dbexcl_lab_x1, y=dbexcl_lab_y1, label=dbexcl_lab1, color="black", size=font_size) + #dbexcl label 1
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_data_y1-0.2, ymax=dbexcl_data_y1+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbexcl_xmin+col_mid_x, y=dbexcl_data_y1+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_data_y1-0.6, ymax=dbexcl_data_y1-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbexcl_xmin+col_mid_x, y=dbexcl_data_y1-0.4, label=as.character(data$db_excl_dup), fontface=2, color="black", size=font_size-0.5) +
annotate(geom="text", x=dbexcl_lab_x2, y=dbexcl_lab_y2, label=dbexcl_lab2, color="black", size=font_size) + #dbexcl label 2
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_data_y2-0.2, ymax=dbexcl_data_y2+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbexcl_xmin+col_mid_x, y=dbexcl_data_y2, label=as.character(data$db_excl_aut), fontface=2, color="black", size=font_size-0.5) +
annotate(geom="text", x=dbexcl_lab_x3, y=dbexcl_lab_y3, label=dbexcl_lab3, color="black", size=font_size) + #dbexcl label 3
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_data_y3-0.2, ymax=dbexcl_data_y3+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbexcl_xmin+col_mid_x, y=dbexcl_data_y3, label=as.character(data$db_excl_oth), fontface=2, color="black", size=font_size-0.5) +
#dbrrecscr
geom_rect(mapping=aes(xmin=dbrrecscr_xmin, xmax=dbrrecscr_xmax, ymin=dbrrecscr_ymin, ymax=dbrrecscr_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrecscr box
annotate(geom="text", x=dbrrecscr_lab_x, y=dbrrecscr_lab_y, label=dbrrecscr_lab, color="black", size=font_size) + #dbrrecscr label
geom_rect(mapping=aes(xmin=dbrrecscr_xmin, xmax=dbrrecscr_xmax, ymin=dbrrecscr_data_y-0.2, ymax=dbrrecscr_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrecscr_xmin+col_mid_x, y=dbrrecscr_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrecscr_xmin, xmax=dbrrecscr_xmax, ymin=dbrrecscr_data_y-0.6, ymax=dbrrecscr_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrecscr_xmin+col_mid_x, y=dbrrecscr_data_y-0.4, label=as.character(data$records_screened), fontface=2, color="black", size=font_size-0.5) +
#dbrrecexcl
geom_rect(mapping=aes(xmin=dbrrecexcl_xmin, xmax=dbrrecexcl_xmax, ymin=dbrrecexcl_ymin, ymax=dbrrecexcl_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrecexcl box
annotate(geom="text", x=dbrrecexcl_lab_x, y=dbrrecexcl_lab_y, label=dbrrecexcl_lab, color="black", size=font_size) + #dbrrecexcl label
geom_rect(mapping=aes(xmin=dbrrecexcl_xmin, xmax=dbrrecexcl_xmax, ymin=dbrrecexcl_data_y-0.2, ymax=dbrrecexcl_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrecexcl_xmin+col_mid_x, y=dbrrecexcl_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrecexcl_xmin, xmax=dbrrecexcl_xmax, ymin=dbrrecexcl_data_y-0.6, ymax=dbrrecexcl_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrecexcl_xmin+col_mid_x, y=dbrrecexcl_data_y-0.4, label=as.character(data$records_excluded), fontface=2, color="black", size=font_size-0.5) +
#otherrepsought
geom_rect(mapping=aes(xmin=otherrepsought_xmin, xmax=otherrepsought_xmax, ymin=otherrepsought_ymin, ymax=otherrepsought_ymax), color="#dcdcdc", fill='#dcdcdc') + #otherrepsought box
annotate(geom="text", x=otherrepsought_lab_x, y=otherrepsought_lab_y, label=otherrepsought_lab, color="black", size=font_size) + #otherrepsought label
geom_rect(mapping=aes(xmin=otherrepsought_xmin, xmax=otherrepsought_xmax, ymin=otherrepsought_data_y-0.2, ymax=otherrepsought_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=otherrepsought_xmin+col_mid_x, y=otherrepsought_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=otherrepsought_xmin, xmax=otherrepsought_xmax, ymin=otherrepsought_data_y-0.6, ymax=otherrepsought_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=otherrepsought_xmin+col_mid_x, y=otherrepsought_data_y-0.4, label=as.character(data$other_sought_reports), fontface=2, color="black", size=font_size-0.5) +
#otherrepnotret
geom_rect(mapping=aes(xmin=otherrepnotret_xmin, xmax=otherrepnotret_xmax, ymin=otherrepnotret_ymin, ymax=otherrepnotret_ymax), color="#dcdcdc", fill='#dcdcdc') + #otherrepnotret box
annotate(geom="text", x=otherrepnotret_lab_x, y=otherrepnotret_lab_y, label=otherrepnotret_lab, color="black", size=font_size) + #otherrepnotret label
geom_rect(mapping=aes(xmin=otherrepnotret_xmin, xmax=otherrepnotret_xmax, ymin=otherrepnotret_data_y-0.2, ymax=otherrepnotret_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=otherrepnotret_xmin+col_mid_x, y=otherrepnotret_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=otherrepnotret_xmin, xmax=otherrepnotret_xmax, ymin=otherrepnotret_data_y-0.6, ymax=otherrepnotret_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=otherrepnotret_xmin+col_mid_x, y=otherrepnotret_data_y-0.4, label=as.character(data$other_notretrieved_reports), fontface=2, color="black", size=font_size-0.5) +
#dbrrepsought
geom_rect(mapping=aes(xmin=dbrrepsought_xmin, xmax=dbrrepsought_xmax, ymin=dbrrepsought_ymin, ymax=dbrrepsought_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrepsought box
annotate(geom="text", x=dbrrepsought_lab_x, y=dbrrepsought_lab_y, label=dbrrepsought_lab, color="black", size=font_size) + #dbrrepsought label
geom_rect(mapping=aes(xmin=dbrrepsought_xmin, xmax=dbrrepsought_xmax, ymin=dbrrepsought_data_y-0.2, ymax=dbrrepsought_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrepsought_xmin+col_mid_x, y=dbrrepsought_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrepsought_xmin, xmax=dbrrepsought_xmax, ymin=dbrrepsought_data_y-0.6, ymax=dbrrepsought_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrepsought_xmin+col_mid_x, y=dbrrepsought_data_y-0.4, label=as.character(data$dbr_sought_reports), fontface=2, color="black", size=font_size-0.5) +
#dbrrepnotret
geom_rect(mapping=aes(xmin=dbrrepnotret_xmin, xmax=dbrrepnotret_xmax, ymin=dbrrepnotret_ymin, ymax=dbrrepnotret_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrepnotret box
annotate(geom="text", x=dbrrepnotret_lab_x, y=dbrrepnotret_lab_y, label=dbrrepnotret_lab, color="black", size=font_size) + #dbrrepnotret label
geom_rect(mapping=aes(xmin=dbrrepnotret_xmin, xmax=dbrrepnotret_xmax, ymin=dbrrepnotret_data_y-0.2, ymax=dbrrepnotret_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrepnotret_xmin+col_mid_x, y=dbrrepnotret_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrepnotret_xmin, xmax=dbrrepnotret_xmax, ymin=dbrrepnotret_data_y-0.6, ymax=dbrrepnotret_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrepnotret_xmin+col_mid_x, y=dbrrepnotret_data_y-0.4, label=as.character(data$dbr_notretrieved_reports), fontface=2, color="black", size=font_size-0.5) +
#otherrep
geom_rect(mapping=aes(xmin=otherrep_xmin, xmax=otherrep_xmax, ymin=otherrep_ymin, ymax=otherrep_ymax), color="#dcdcdc", fill='#dcdcdc') + #otherrep box
annotate(geom="text", x=otherrep_lab_x, y=otherrep_lab_y, label=otherrep_lab, color="black", size=font_size) + #otherrep label
geom_rect(mapping=aes(xmin=otherrep_xmin, xmax=otherrep_xmax, ymin=otherrep_data_y-0.2, ymax=otherrep_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=otherrep_xmin+col_mid_x, y=otherrep_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=otherrep_xmin, xmax=otherrep_xmax, ymin=otherrep_data_y-0.6, ymax=otherrep_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=otherrep_xmin+col_mid_x, y=otherrep_data_y-0.4, label=as.character(data$other_assessed), fontface=2, color="black", size=font_size-0.5) +
#otherrepexcl
geom_rect(mapping=aes(xmin=otherrepexcl_xmin, xmax=otherrepexcl_xmax, ymin=otherrepexcl_ymin, ymax=otherrepexcl_ymax), color="#dcdcdc", fill='#dcdcdc') + #otherrepexcl box
annotate(geom="text", x=otherrepexcl_lab_x, y=otherrepexcl_lab_y, label=otherrepexcl_lab, color="black", size=font_size) + #otherrepexcl label
geom_rect(mapping=aes(xmin=otherrepexcl_xmin, xmax=otherrepexcl_xmax, ymin=otherrepexcl_data_y-0.2, ymax=otherrepexcl_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=otherrepexcl_xmin+col_mid_x, y=otherrepexcl_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=otherrepexcl_xmin, xmax=otherrepexcl_xmax, ymin=otherrepexcl_data_y-0.6, ymax=otherrepexcl_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=otherrepexcl_xmin+col_mid_x, y=otherrepexcl_data_y-0.4, label=as.character(data$other_excluded_data), fontface=2, color="black", size=font_size-0.5) +
annotate(geom="text", x=otherrepexcl_lab_x, y=otherrepexclreasons_lab_y, label=data$other_excluded, color="black", size=font_size-0.5, vjust=1) + #otherrepexcl reasons
#dbrrep
geom_rect(mapping=aes(xmin=dbrrep_xmin, xmax=dbrrep_xmax, ymin=dbrrep_ymin, ymax=dbrrep_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrep box
annotate(geom="text", x=dbrrep_lab_x, y=dbrrep_lab_y, label=dbrrep_lab, color="black", size=font_size) + #dbrrep label
geom_rect(mapping=aes(xmin=dbrrep_xmin, xmax=dbrrep_xmax, ymin=dbrrep_data_y-0.2, ymax=dbrrep_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrep_xmin+col_mid_x, y=dbrrep_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrep_xmin, xmax=dbrrep_xmax, ymin=dbrrep_data_y-0.6, ymax=dbrrep_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrep_xmin+col_mid_x, y=dbrrep_data_y-0.4, label=as.character(data$dbr_assessed), fontface=2, color="black", size=font_size-0.5) +
#dbrrepexcl
geom_rect(mapping=aes(xmin=dbrrepexcl_xmin, xmax=dbrrepexcl_xmax, ymin=dbrrepexcl_ymin, ymax=dbrrepexcl_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrepexcl box
annotate(geom="text", x=dbrrepexcl_lab_x, y=dbrrepexcl_lab_y, label=dbrrepexcl_lab, color="black", size=font_size) + #dbrrepexcl label
geom_rect(mapping=aes(xmin=dbrrepexcl_xmin, xmax=dbrrepexcl_xmax, ymin=dbrrepexcl_data_y-0.2, ymax=dbrrepexcl_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrepexcl_xmin+col_mid_x, y=dbrrepexcl_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrepexcl_xmin, xmax=dbrrepexcl_xmax, ymin=dbrrepexcl_data_y-0.6, ymax=dbrrepexcl_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrepexcl_xmin+col_mid_x, y=dbrrepexcl_data_y-0.4, label=as.character(data$dbr_excluded_data), fontface=2, color="black", size=font_size-0.5) +
annotate(geom="text", x=dbrrepexcl_lab_x, y=dbrrepexclreasons_lab_y, label=data$dbr_excluded, color="black", size=font_size-0.25, vjust=1) + #dbrrepexcl reasons
#new
geom_rect(mapping=aes(xmin=new_xmin, xmax=new_xmax, ymin=new_ymin, ymax=new_ymax), color="#dcdcdc", fill='#dcdcdc') + #new box
annotate(geom="text", x=new_lab_x1, y=new_lab_y1, label=new_lab1, color="black", size=font_size) + #new label 1
annotate(geom="text", x=new_lab_x1, y=new_lab_y2, label=new_lab2, color="black", size=font_size) + #new label 2
geom_rect(mapping=aes(xmin=new_xmin, xmax=new_xmax, ymin=new_data_y1-0.2, ymax=new_data_y1+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=new_xmin+col_mid_x, y=new_data_y1+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=new_xmin, xmax=new_xmax, ymin=new_data_y1-0.6, ymax=new_data_y1-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=new_xmin+col_mid_x, y=new_data_y1-0.4, label=as.character(data$new_studies), fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=new_xmin, xmax=new_xmax, ymin=new_data_y2-0.2, ymax=new_data_y2+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=new_xmin+col_mid_x, y=new_data_y2, label=as.character(data$new_reports), fontface=2, color="black", size=font_size-0.5)
} else {
#Exclude other
#Generate plot
canvas <- ggplot(df, aes(x = x, y = y)) +
ggpubr::theme_transparent(base_size = 12, base_family = "") +
scale_x_continuous(name="x") +
scale_y_continuous(name="y")
plot <- canvas +
geom_rrect(mapping=aes(xmin=ident_xmin, xmax=ident_xmax, ymin=ident_ymin, ymax=ident_ymax), color="#bcd1ee", fill="#bcd1ee") + #identification box
geom_rrect(mapping=aes(xmin=screen_xmin, xmax=screen_xmax, ymin=screen_ymin, ymax=screen_ymax), color="#bcd1ee", fill="#bcd1ee") + #screening box
geom_rrect(mapping=aes(xmin=incl_xmin, xmax=incl_xmax, ymin=incl_ymin, ymax=incl_ymax), color="#bcd1ee", fill="#bcd1ee") + #included box
geom_rrect(mapping=aes(xmin=dbr_xmin, xmax=dbr_xmax, ymin=dbr_ymin, ymax=dbr_ymax), color="#ffc125", fill="#ffc125") + #dbr box
annotate(geom="text", x=ident_lab_x, y=ident_lab_y, label=ident_lab, color="black", size=font_size, angle = 90) +
annotate(geom="text", x=screen_lab_x, y=screen_lab_y, label=screen_lab, color="black", size=font_size, angle = 90) +
annotate(geom="text", x=incl_lab_x, y=incl_lab_y, label=incl_lab, color="black", size=font_size, angle = 90) +
annotate(geom="text", x=dbr_lab_x, y=dbr_lab_y, label=dbr_lab, color="black", size=font_size) +
#arrows
geom_segment(aes(x = dbident_xmin+(box_width/2), y = dbident_ymin-0.1, xend = dbrrecscr_xmin+(box_width/2), yend = dbrrecscr_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbident_xmax+(0.1*label_width), y = dbident_ymin+(box_height2/2), xend = dbexcl_xmin-(0.1*label_width), yend = dbident_ymin+(box_height2/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrecscr_xmin+(box_width/2), y = dbrrecscr_ymin-0.1, xend = dbrrepsought_xmin+(box_width/2), yend = dbrrepsought_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrecscr_xmax+(0.1*label_width), y = dbrrecexcl_ymin+(box_height1/2), xend = dbrrecexcl_xmin-(0.1*label_width), yend = dbrrecexcl_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrepsought_xmin+(box_width/2), y = dbrrepsought_ymin-0.1, xend = dbrrep_xmin+(box_width/2), yend = dbrrep_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrepsought_xmax+(0.1*label_width), y = dbrrepsought_ymin+(box_height1/2), xend = dbrrepnotret_xmin-(0.1*label_width), yend = dbrrepsought_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrep_xmin+(box_width/2), y = dbrrep_ymin-0.1, xend = dbrrep_xmin+(box_width/2), yend = new_ymax+0.1), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
geom_segment(aes(x = dbrrep_xmax+(0.1*label_width), y = dbrrep_ymin+(box_height1/2), xend = dbrrepexcl_xmin-(0.1*label_width), yend = dbrrep_ymin+(box_height1/2)), lineend = 'round', linejoin = 'round', arrow=arrow(length = unit(2, "mm"), type = "closed"), colour = "gray40") +
#dbident
geom_rect(mapping=aes(xmin=dbident_xmin, xmax=dbident_xmax, ymin=dbident_ymin, ymax=dbident_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbident box
annotate(geom="text", x=dbident_lab_x, y=dbident_lab_y, label=dbident_lab, color="black", size=font_size) + #dbident label
annotate(geom="text", x=dbident_lab_x1, y=dbident_lab_y1, label=dbident_lab1, color="black", size=font_size) + #dbident label 1
annotate(geom="text", x=dbident_lab_x2, y=dbident_lab_y2, label=dbident_lab2, color="black", size=font_size) + #dbident label 2
geom_rect(mapping=aes(xmin=dbident_xmin, xmax=dbident_xmax, ymin=dbident_data_y1-0.2, ymax=dbident_data_y1+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbident_xmin+col_mid_x, y=dbident_data_y1+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbident_xmin, xmax=dbident_xmax, ymin=dbident_data_y1-0.6, ymax=dbident_data_y1-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbident_xmin+col_mid_x, y=dbident_data_y1-0.4, label=as.character(data$database_results), fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbident_xmin, xmax=dbident_xmax, ymin=dbident_data_y2-0.2, ymax=dbident_data_y2+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbident_xmin+col_mid_x, y=dbident_data_y2, label=as.character(data$register_results), fontface=2, color="black", size=font_size-0.5) +
#dbexcl
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_ymin, ymax=dbexcl_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbexcl box
annotate(geom="text", x=dbexcl_lab_x, y=dbexcl_lab_y, label=dbexcl_lab, color="black", size=font_size) + #dbexcl label
annotate(geom="text", x=dbexcl_lab_x1, y=dbexcl_lab_y1, label=dbexcl_lab1, color="black", size=font_size) + #dbexcl label 1
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_data_y1-0.2, ymax=dbexcl_data_y1+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbexcl_xmin+col_mid_x, y=dbexcl_data_y1+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_data_y1-0.6, ymax=dbexcl_data_y1-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbexcl_xmin+col_mid_x, y=dbexcl_data_y1-0.4, label=as.character(data$db_excl_dup), fontface=2, color="black", size=font_size-0.5) +
annotate(geom="text", x=dbexcl_lab_x2, y=dbexcl_lab_y2, label=dbexcl_lab2, color="black", size=font_size) + #dbexcl label 2
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_data_y2-0.2, ymax=dbexcl_data_y2+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbexcl_xmin+col_mid_x, y=dbexcl_data_y2, label=as.character(data$db_excl_aut), fontface=2, color="black", size=font_size-0.5) +
annotate(geom="text", x=dbexcl_lab_x3, y=dbexcl_lab_y3, label=dbexcl_lab3, color="black", size=font_size) + #dbexcl label 3
geom_rect(mapping=aes(xmin=dbexcl_xmin, xmax=dbexcl_xmax, ymin=dbexcl_data_y3-0.2, ymax=dbexcl_data_y3+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbexcl_xmin+col_mid_x, y=dbexcl_data_y3, label=as.character(data$db_excl_oth), fontface=2, color="black", size=font_size-0.5) +
#dbrrecscr
geom_rect(mapping=aes(xmin=dbrrecscr_xmin, xmax=dbrrecscr_xmax, ymin=dbrrecscr_ymin, ymax=dbrrecscr_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrecscr box
annotate(geom="text", x=dbrrecscr_lab_x, y=dbrrecscr_lab_y, label=dbrrecscr_lab, color="black", size=font_size) + #dbrrecscr label
geom_rect(mapping=aes(xmin=dbrrecscr_xmin, xmax=dbrrecscr_xmax, ymin=dbrrecscr_data_y-0.2, ymax=dbrrecscr_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrecscr_xmin+col_mid_x, y=dbrrecscr_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrecscr_xmin, xmax=dbrrecscr_xmax, ymin=dbrrecscr_data_y-0.6, ymax=dbrrecscr_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrecscr_xmin+col_mid_x, y=dbrrecscr_data_y-0.4, label=as.character(data$records_screened), fontface=2, color="black", size=font_size-0.5) +
#dbrrecexcl
geom_rect(mapping=aes(xmin=dbrrecexcl_xmin, xmax=dbrrecexcl_xmax, ymin=dbrrecexcl_ymin, ymax=dbrrecexcl_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrecexcl box
annotate(geom="text", x=dbrrecexcl_lab_x, y=dbrrecexcl_lab_y, label=dbrrecexcl_lab, color="black", size=font_size) + #dbrrecexcl label
geom_rect(mapping=aes(xmin=dbrrecexcl_xmin, xmax=dbrrecexcl_xmax, ymin=dbrrecexcl_data_y-0.2, ymax=dbrrecexcl_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrecexcl_xmin+col_mid_x, y=dbrrecexcl_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrecexcl_xmin, xmax=dbrrecexcl_xmax, ymin=dbrrecexcl_data_y-0.6, ymax=dbrrecexcl_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrecexcl_xmin+col_mid_x, y=dbrrecexcl_data_y-0.4, label=as.character(data$records_excluded), fontface=2, color="black", size=font_size-0.5) +
#dbrrepsought
geom_rect(mapping=aes(xmin=dbrrepsought_xmin, xmax=dbrrepsought_xmax, ymin=dbrrepsought_ymin, ymax=dbrrepsought_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrepsought box
annotate(geom="text", x=dbrrepsought_lab_x, y=dbrrepsought_lab_y, label=dbrrepsought_lab, color="black", size=font_size) + #dbrrepsought label
geom_rect(mapping=aes(xmin=dbrrepsought_xmin, xmax=dbrrepsought_xmax, ymin=dbrrepsought_data_y-0.2, ymax=dbrrepsought_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrepsought_xmin+col_mid_x, y=dbrrepsought_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrepsought_xmin, xmax=dbrrepsought_xmax, ymin=dbrrepsought_data_y-0.6, ymax=dbrrepsought_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrepsought_xmin+col_mid_x, y=dbrrepsought_data_y-0.4, label=as.character(data$dbr_sought_reports), fontface=2, color="black", size=font_size-0.5) +
#dbrrepnotret
geom_rect(mapping=aes(xmin=dbrrepnotret_xmin, xmax=dbrrepnotret_xmax, ymin=dbrrepnotret_ymin, ymax=dbrrepnotret_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrepnotret box
annotate(geom="text", x=dbrrepnotret_lab_x, y=dbrrepnotret_lab_y, label=dbrrepnotret_lab, color="black", size=font_size) + #dbrrepnotret label
geom_rect(mapping=aes(xmin=dbrrepnotret_xmin, xmax=dbrrepnotret_xmax, ymin=dbrrepnotret_data_y-0.2, ymax=dbrrepnotret_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrepnotret_xmin+col_mid_x, y=dbrrepnotret_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrepnotret_xmin, xmax=dbrrepnotret_xmax, ymin=dbrrepnotret_data_y-0.6, ymax=dbrrepnotret_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrepnotret_xmin+col_mid_x, y=dbrrepnotret_data_y-0.4, label=as.character(data$dbr_notretrieved_reports), fontface=2, color="black", size=font_size-0.5) +
#dbrrep
geom_rect(mapping=aes(xmin=dbrrep_xmin, xmax=dbrrep_xmax, ymin=dbrrep_ymin, ymax=dbrrep_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrep box
annotate(geom="text", x=dbrrep_lab_x, y=dbrrep_lab_y, label=dbrrep_lab, color="black", size=font_size) + #dbrrep label
geom_rect(mapping=aes(xmin=dbrrep_xmin, xmax=dbrrep_xmax, ymin=dbrrep_data_y-0.2, ymax=dbrrep_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrep_xmin+col_mid_x, y=dbrrep_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrep_xmin, xmax=dbrrep_xmax, ymin=dbrrep_data_y-0.6, ymax=dbrrep_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrep_xmin+col_mid_x, y=dbrrep_data_y-0.4, label=as.character(data$dbr_assessed), fontface=2, color="black", size=font_size-0.5) +
#dbrrepexcl
geom_rect(mapping=aes(xmin=dbrrepexcl_xmin, xmax=dbrrepexcl_xmax, ymin=dbrrepexcl_ymin, ymax=dbrrepexcl_ymax), color="#dcdcdc", fill='#dcdcdc') + #dbrrepexcl box
annotate(geom="text", x=dbrrepexcl_lab_x, y=dbrrepexcl_lab_y, label=dbrrepexcl_lab, color="black", size=font_size) + #dbrrepexcl label
geom_rect(mapping=aes(xmin=dbrrepexcl_xmin, xmax=dbrrepexcl_xmax, ymin=dbrrepexcl_data_y-0.2, ymax=dbrrepexcl_data_y+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=dbrrepexcl_xmin+col_mid_x, y=dbrrepexcl_data_y+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=dbrrepexcl_xmin, xmax=dbrrepexcl_xmax, ymin=dbrrepexcl_data_y-0.6, ymax=dbrrepexcl_data_y-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=dbrrepexcl_xmin+col_mid_x, y=dbrrepexcl_data_y-0.4, label=as.character(data$dbr_excluded_data), fontface=2, color="black", size=font_size-0.5) +
annotate(geom="text", x=dbrrepexcl_lab_x, y=dbrrepexclreasons_lab_y, label=data$dbr_excluded, color="black", size=font_size-0.25, vjust=1) + #dbrrepexcl reasons
#new
geom_rect(mapping=aes(xmin=new_xmin, xmax=new_xmax, ymin=new_ymin, ymax=new_ymax), color="#dcdcdc", fill='#dcdcdc') + #new box
annotate(geom="text", x=new_lab_x1, y=new_lab_y1, label=new_lab1, color="black", size=font_size) + #new label 1
annotate(geom="text", x=new_lab_x1, y=new_lab_y2, label=new_lab2, color="black", size=font_size) + #new label 2
geom_rect(mapping=aes(xmin=new_xmin, xmax=new_xmax, ymin=new_data_y1-0.2, ymax=new_data_y1+0.9), color="gray75", fill='gray75') + #dark background
annotate(geom="text", x=new_xmin+col_mid_x, y=new_data_y1+0.4, label=columns, fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=new_xmin, xmax=new_xmax, ymin=new_data_y1-0.6, ymax=new_data_y1-0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=new_xmin+col_mid_x, y=new_data_y1-0.4, label=as.character(data$new_studies), fontface=2, color="black", size=font_size-0.5) +
geom_rect(mapping=aes(xmin=new_xmin, xmax=new_xmax, ymin=new_data_y2-0.2, ymax=new_data_y2+0.2), color="gray95", fill='gray95') + #light background
annotate(geom="text", x=new_xmin+col_mid_x, y=new_data_y2, label=as.character(data$new_reports), fontface=2, color="black", size=font_size-0.5)
}
}
return(plot)
}
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.