Description Usage Arguments Value
View source: R/robust_brain_mask.R
Masks the brain from scan using a rigid body transformation of the template mask to the native brain space and then inflating the mask to adjust for mis-registration.
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file |
File for masking - either filename or class nifti |
template.file |
Template to warp to original image space |
template.mask |
Mask of template to use as rough brain mask. If
|
nvoxels |
Number of voxels in nxnxn direction to inflate, see
|
ret_mask |
Return mask of robust brain |
typeofTransform |
Transformation for template to image, passed to
|
verbose |
Print diagnostic progress |
... |
Arguments passed to |
Object of class nifti or vector of indices
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