Description Usage Arguments Value See Also
This function wraps fslbet
and
bias_correct
, performing skull stripping first
1 2 3 4 |
filename |
filename to be processed |
maskfile |
filename of masked to be passed in, otherwise bet is performed |
outfile |
output filename with extension (e.g. |
skull_strip |
should skull stripping be done |
bet.opts |
options for fslbet |
betcmd |
bet command to be used see |
correct |
should n3 correction be done stripping be done |
correction |
correction method used see |
shrinkfactor |
correction method used see |
retimg |
(logical) return image of class nifti |
reorient |
(logical) If retimg, should file be reoriented when read in?
Passed to |
verbose |
Diagnostic output |
... |
passed to |
Filename of output file or object of class nifti
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