API for neurogenomics/MultiEWCE
Multi-Scale Target Explorer
| Global functions | |
|---|---|
| add_ctd | Man page Source code |
| add_driver_genes | Source code |
| add_logfc | Man page Source code |
| add_symptom_results | Man page Source code |
| add_top_value | Source code |
| agg_results | Man page Source code |
| celltype_maps | Man page |
| construct_labeller | Source code |
| correlation_heatmap | Man page Source code |
| create_dt | Man page Source code |
| ewce_para | Man page Source code |
| example_targets | Man page |
| extract_filters | Source code |
| extract_help | Man page Source code |
| filter_ggstatsplot | Source code |
| fix_cl_ids | Source code |
| gen_overlap | Man page Source code |
| gen_overlap_test | Source code |
| gen_results | Man page Source code |
| gen_results_save_path | Source code |
| get_bg | Man page Source code |
| get_color_map | Source code |
| get_data | Man page Source code |
| get_ggstatsplot_stats | Source code |
| get_target_branches | Man page Source code |
| get_target_celltypes | Source code |
| get_unfinished_list_names | Man page |
| get_valid_gene_lists | Man page Source code |
| ggnetwork_plot_full | Man page Source code |
| is_not_analysed | Man page Source code |
| limit_facets | Source code |
| load_example_ctd | Man page Source code |
| load_example_results | Man page Source code |
| make_save_path | Source code |
| make_specificity_dt | Source code |
| map_celltype | Man page Source code |
| map_ctd_levels | Source code |
| map_tissue | Man page Source code |
| merge_results | Man page Source code |
| messager | Man page Source code |
| ontology_to_ggdendro | Source code |
| plot_ | Man page |
| plot_bar_dendro | Man page Source code |
| plot_bar_dendro_facets | Man page Source code |
| plot_bar_summary | Man page Source code |
| plot_celltype_severity | Man page Source code |
| plot_congenital_annotations | Man page Source code |
| plot_density_cor | Source code |
| plot_differential_outcomes | Man page Source code |
| plot_differential_outcomes_ggstatsplot | Source code |
| plot_differential_outcomes_heatmap | Man page Source code |
| plot_frequency_bar | Man page Source code |
| plot_frequency_bar_i | Source code |
| plot_frequency_histogram | Man page Source code |
| plot_frequency_prepare | Source code |
| plot_ontology_levels | Man page Source code |
| plot_report | Man page Source code |
| plot_results_distributions | Man page Source code |
| plot_tissues | Source code |
| plot_ttd | Man page Source code |
| predict_celltypes | Man page Source code |
| prepare_congenital_annotations | Source code |
| prioritise_targets | Man page Source code |
| prioritise_targets_grid | Man page Source code |
| prioritise_targets_heatmap | Source code |
| prioritise_targets_network | Man page Source code |
| report | Source code |
| run_congenital_enrichment | Man page Source code |
| run_phenomix | Man page Source code |
| run_similarity | Source code |
| save_results | Source code |
| stopper | Man page Source code |
| subset_phenos | Man page Source code |
| subset_results | Man page Source code |
| summarise_results | Man page Source code |
| targets_to_graph | Source code |
| terminal_celltypes | Man page Source code |
| test_target_celltypes | Man page Source code |
| tissue_maps | Man page |
| ttd_check | Man page Source code |
| ttd_hypergeo | Source code |
| validate_associations_correlate_ctd | Man page Source code |
| validate_associations_mkg | Man page Source code |
| validate_associations_mkg_dist | Source code |
