igraphmask: Mask function for igraph::plot.igraph() to visualize a...

In nevrome/varnastats: Analyse some aspects of prehistoric burial sites

Description

igraphmask is an input mask for the plot.igraph() function of the package igraph. plot.igraph() creates graph plots based on bivariate relations. See ?igraph for further info. igraphmask allows to get a nice, basic graph plot as a png-file that is directly saved to the file system. It doesn't allow to define specific plot settings.

Usage

igraphmask(reltable, mypath, w = 3000, h = 3000,
  colorvector = c("red"))

Arguments

reltable	list of bivariate relations (as produced by varnastats::reltable())
mypath	file.path where the plot file should be stored mypath <- file.path("~/path/to/my/directory/",paste("myfilename", ".png", sep = ""))
w	width of the resulting graphic file in px default = 3000
h	width of the resulting graphic file in px default = 3000
colorvector	string vector with colour values to mark certain vertices default = c("red")

Details

For graph layout the fruchterman.reingold.grid algorithm is used.

Value

graphic file of a graph plot

Examples

testmatrixrand <- data.frame(
   matrix(base::sample(0:1,400,replace=TRUE), nrow=20, ncol=20)
)

testcorr <- corrmat(testmatrixrand, "lambda", chi2limit = 0.1, dim = 1)
testrel <- reltable(testcorr)

testpath <- file.path(".",paste("testfile", ".png", sep = ""))

igraphmask(testrel, testpath, w = 1000, h = 1000)

nevrome/varnastats documentation built on May 9, 2019, 10:43 a.m.