polyIBD: Inferring blocks of identity by descent between polyclonal samples using unphased haplotype data

Global functions | |
---|---|

.onUnload | Source code |

Rcpp_to_mat | Source code |

assert_2d | Source code |

assert_atomic | Source code |

assert_bounded | Source code |

assert_custom_class | Source code |

assert_dataframe | Source code |

assert_decreasing | Source code |

assert_dim | Source code |

assert_eq | Source code |

assert_file_exists | Source code |

assert_gr | Source code |

assert_greq | Source code |

assert_in | Source code |

assert_increasing | Source code |

assert_int | Source code |

assert_le | Source code |

assert_length | Source code |

assert_leq | Source code |

assert_limit | Source code |

assert_list | Source code |

assert_logical | Source code |

assert_matrix | Source code |

assert_ncol | Source code |

assert_neq | Source code |

assert_noduplicates | Source code |

assert_non_null | Source code |

assert_not_in | Source code |

assert_nrow | Source code |

assert_null | Source code |

assert_numeric | Source code |

assert_pos | Source code |

assert_pos_int | Source code |

assert_same_length | Source code |

assert_same_length_multiple | Source code |

assert_single | Source code |

assert_single_bounded | Source code |

assert_single_int | Source code |

assert_single_logical | Source code |

assert_single_numeric | Source code |

assert_single_pos | Source code |

assert_single_pos_int | Source code |

assert_single_string | Source code |

assert_square_matrix | Source code |

assert_string | Source code |

assert_symmetric_matrix | Source code |

assert_vector | Source code |

checkConvergence | Source code |

getTransProbs | Man page Source code |

is.polyIBD | Source code |

is.polyIBDinput | Source code |

mat_to_Rcpp | Source code |

nice_format | Source code |

pfcross_subset | Man page |

polyIBD | Man page |

polyIBD-package | Man page |

polyIBDinput_to_Rcppcompat | Source code |

print.polyIBD | Source code |

print.polyIBDinput | Source code |

runMCMC | Man page Source code |

runMCMC_cpp | Source code |

simData | Man page Source code |

simIBD | Man page Source code |

summary.polyIBD | Source code |

summary.polyIBDinput | Source code |

vcf2polyIBDinput | Man page Source code |

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