API for nixstix/RNASeqAnalysis
Analysis of RNA-Seq data: QC filtering, expression analysis, differential expression pipeline

Global functions
addKallistoResToTable Man page Source code
availableReferences Man page Source code
checkColHeadings Source code
checkDataFile Man page Source code
collectKallistoCounts Man page Source code
collectKallistoCountsTXItoGene Man page Source code
compareQA Man page Source code
consolidateData Source code
dataFilePE Source code
dataFileSE Source code
datafileTemplate Man page
filterAndTrimPE Source code
filterAndTrimSE Source code
filterBadSeqs Man page Source code
getResults Source code
kallistoIndex Man page Source code
kallistoQuant Man page Source code
kallistoQuantRunPE Source code
kallistoQuantRunSE Source code
replFiltfile Source code
runQA Man page Source code
summariseFilteringStats Man page Source code
nixstix/RNASeqAnalysis documentation built on May 23, 2017, 3:41 p.m.