noemiandor/liayson: Linking Singe-Cell Transcriptomes Atween Contemporary Subpopulation Genomes
Given an RNA-seq derived cell-by-gene matrix and an DNA-seq derived copy number segmentation, LIAYSON predicts the number of clones present in a tumor, their size, the copy number profile of each clone and the clone membership of each single cell (Andor, N. & Lau, B., et al. (2018) <doi:10.1101/445932>).
Getting started
Browse package contents
Package details |
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| Author | Noemi Andor |
| Maintainer | Noemi Andor <liayson.scRNA.R@gmail.com> |
| License | GPL-2 |
| Version | 1.0.4 |
| URL | https://github.com/noemiandor/liayson https://groups.google.com/d/forum/liayson |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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