aggregateSegmentExpression | Aggregating genes across copy number segments. |
assignCellsToClusters | Assigns cells to previously defined clones. |
clusterCells | Grouping cells into clones. |
cnps | Segment-by-cell matrix of copy number states from NCI-N87... |
epg | Gene-by-cell matrix of expression from NCI-N87 cell line. |
eps | Segment-by-cell matrix of expression from NCI-N87 cell line. |
getNumRes | Clone size resolution. |
runLIAYSON | Main Function. |
saveClusteredCells | Saving clones to user-defined output. |
segmentExpression2CopyNumber | Calling CNVs. |
segments | Bulk copy number profile of NCI-N87 cell line. |
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