segments: Bulk copy number profile of NCI-N87 cell line.

Description Usage Format Source

Description

Copy number segmentation matrix obtained as average among G0G1 cells.

Usage

1

Format

Matrix in which each row corresponds to a copy number segment as calculated by a circular binary segmentation algorithm. Has to contain at least the following column names:
chr - chromosome;
startpos - the first genomic position of a copy number segment;
endpos - the last genomic position of a copy number segment;
CN_Estimate - the copy number estimated for each segment.

Source

Data obtained from Ji lab at Stanford.


noemiandor/liayson documentation built on Dec. 13, 2018, 10:24 p.m.