get_variants: Getting variants called by haplotype caller in tapestri...
In northNomad/tapestri.tools: A toolbox for the analysis of tapestri single cell multi-omics data
get_variants R Documentation
Getting variants called by haplotype caller in tapestri pipeline
Description
get_variant retrieves all the dna variants in an .h5 file as a data.table or GRanges
Usage
get_variants(h5f, format = c("data.table", "GRanges"))
Arguments
h5f
h5f
format
data.table by default.
Examples
path <- "path/to/.h5"
h5f <- read_h5f(path)
feature_data <- get_variants(h5f)
northNomad/tapestri.tools documentation built on May 31, 2024, 4:44 p.m.
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| get_variants | R Documentation |
Getting variants called by haplotype caller in tapestri pipeline
Description
get_variant retrieves all the dna variants in an .h5 file as a data.table or GRanges
Usage
get_variants(h5f, format = c("data.table", "GRanges"))
Arguments
h5f |
h5f |
format |
|
Examples
path <- "path/to/.h5"
h5f <- read_h5f(path)
feature_data <- get_variants(h5f)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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