read_scite_output: Read SCITE output
In northNomad/tapestri.tools: A toolbox for the analysis of tapestri single cell multi-omics data
read_scite_output R Documentation
Read SCITE output
Description
Designate the clone of each cell based on SCITE. If ambiguous, a random clone from all possible clones is selected.
Usage
read_scite_output(file, cell_index_h5f, seed = 123)
Arguments
file
path to SCITE output file in .gv format.
cell_index_h5f
A numeric vector. The index of cells used for scite in the .h5f
seed
integer.
Value
data.table
Examples
## Not run:
read_scite_out("scite_output.gv")
## End(Not run)
northNomad/tapestri.tools documentation built on May 31, 2024, 4:44 p.m.
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| read_scite_output | R Documentation |
Read SCITE output
Description
Designate the clone of each cell based on SCITE. If ambiguous, a random clone from all possible clones is selected.
Usage
read_scite_output(file, cell_index_h5f, seed = 123)
Arguments
file |
path to SCITE output file in .gv format. |
cell_index_h5f |
A numeric vector. The index of cells used for scite in the .h5f |
seed |
integer. |
Value
data.table
Examples
## Not run:
read_scite_out("scite_output.gv")
## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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