vectorizePatterns: Create a binary vector of patterns observed at a clinical...

In novasmedley/gbmSpm: Find predictive sequential patterns for clinical glioblastoma patients

Description

Create a binary vector of patterns observed at a clinical visit.

Usage

vectorizePatterns(patternDays)

Arguments

patternDays

list of patterns found by cSPADE, for each pattern there is a list of patientIDs (see getPatIDs), for each patientID there is a list of eventIDs when the pattern was observed

Details

For every clinical visit, each pattern has a value of 1 (present) or 0 (absent).

Value

dataframe, rows of clinical visits, cols of binary features (0: observed, 1: not observed)

Examples

data("patterns_ratechange_sup0.4g60l2z2") # days when pattern occurred
features <- vectorizePatterns(patternDays)

novasmedley/gbmSpm documentation built on May 17, 2019, 10:39 a.m.