freecPlot: FreecPlot

In nriddiford/cnvPlotteR: Plotting functions for CNV data

Description

Function to plot the corrected CN for Control Freec "ratio" files.

Usage

freecPlot(cnv_file = "data/freec/HUM-7.tagged.filt.SC.RG.bam_ratio.txt",
  chroms = c("2L", "2R", "3L", "3R", "X"), write = F)

Arguments

cnv_file	File to plot. [Required]
chroms	Chromosomes to plot
write	Write plot to file? T/F

Examples

freecPlot(cnv_file = "data/freec/HUM-7.tagged.filt.SC.RG.bam_ratio.txt")

nriddiford/cnvPlotteR documentation built on Aug. 28, 2020, 5:31 a.m.