listCellsToCollapse-MixedSpeciesSample-method: List cells that are candidates for collapsing.
In nukappa/dropseq: dropbead
Description
Identify and list cells which share 11 bases in their barcodes and only the last
one is different. The cells are marked as candidates if and only if they're classified
as belonging to the same species.
Usage
1
2
## S4 method for signature 'MixedSpeciesSample'
listCellsToCollapse(object, threshold = 0.9)
Arguments
A
MixedSpeciesSample object.
nukappa/dropseq documentation built on May 24, 2019, 9:57 a.m.
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Description
Identify and list cells which share 11 bases in their barcodes and only the last one is different. The cells are marked as candidates if and only if they're classified as belonging to the same species.
Usage
1 2 | ## S4 method for signature 'MixedSpeciesSample'
listCellsToCollapse(object, threshold = 0.9)
|
Arguments
A |
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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