getCMapPerturbationTypes: Get CMap perturbation types

In nuno-agostinho/cTRAP: Identification of candidate causal perturbations from differential gene expression data

Get CMap perturbation types

Description

Get CMap perturbation types

Usage

getCMapPerturbationTypes(control = FALSE)

Arguments

control

Boolean: return perturbation types used as control?

Value

Perturbation types and respective codes as used by CMap datasets

See Also

Other functions related with the ranking of CMap perturbations: as.table.referenceComparison(), filterCMapMetadata(), getCMapConditions(), loadCMapData(), loadCMapZscores(), parseCMapID(), plot.perturbationChanges(), plot.referenceComparison(), plotTargetingDrugsVSsimilarPerturbations(), prepareCMapPerturbations(), print.similarPerturbations(), rankSimilarPerturbations()

Examples

getCMapPerturbationTypes()

nuno-agostinho/cTRAP documentation built on Jan. 2, 2025, 12:11 a.m.