loadDrugDescriptors: Load table with drug descriptors

View source: R/drugSetEnrichment.R

loadDrugDescriptorsR Documentation

Load table with drug descriptors

Description

Load table with drug descriptors

Usage

loadDrugDescriptors(
  source = c("NCI60", "CMap"),
  type = c("2D", "3D"),
  file = NULL,
  path = NULL
)

Arguments

source

Character: source of compounds used to calculate molecular descriptors (NCI60 or CMap)

type

Character: load 2D or 3D molecular descriptors

file

Character: filepath to drug descriptors (automatically downloaded if file does not exist)

path

Character: folder where to find files (optional; file may contain the full filepath if preferred)

Value

Data table with drug descriptors

See Also

Other functions for drug set enrichment analysis: analyseDrugSetEnrichment(), plotDrugSetEnrichment(), prepareDrugSets()

Examples

loadDrugDescriptors()

nuno-agostinho/cTRAP documentation built on Feb. 4, 2024, 5:39 p.m.