launchDiffExprLoader: Load differential expression data via a visual interface

In nuno-agostinho/cTRAP: Identification of candidate causal perturbations from differential gene expression data

Load differential expression data via a visual interface

Description

Currently only supports loading data from ENCODE knockdown experiments

Usage

launchDiffExprLoader(
  cellLine = NULL,
  gene = NULL,
  file = "ENCODEmetadata.rds",
  path = "."
)

Arguments

cellLine	Character: cell line
gene	Character: target gene
file	Character: RDS filepath with metadata (if file doesn't exist, it will be created)
path	Character: path where to download files

Value

Differential expression data

See Also

Other visual interface functions: cTRAP(), launchCMapDataLoader(), launchDrugSetEnrichmentAnalyser(), launchMetadataViewer(), launchResultPlotter()

nuno-agostinho/cTRAP documentation built on March 28, 2024, 3:59 p.m.