wilcox: Perform and display statistical analysis

In nuno-agostinho/psichomics: Graphical Interface for Alternative Splicing Quantification, Analysis and Visualisation

Perform and display statistical analysis

Description

Includes interface containing the results

Usage

wilcox(data, groups, stat = NULL)

ttest(data, groups, stat = NULL)

levene(data, groups, stat = NULL)

fligner(data, groups, stat = NULL)

kruskal(data, groups, stat = NULL)

fisher(data, groups)

spearman(data, groups)

Arguments

data	Numeric, data frame or matrix: gene expression data or alternative splicing event quantification values (sample names are based on their names or colnames)
groups	List of sample names or vector containing the group name per data value (read Details); if NULL or a character vector of length 1, data values are considered from the same group
stat	Data frame or matrix: values of the analyses to be performed (if NULL, the analyses will be performed)

Details

• ttest: unpaired t-test

• wilcox: Wilcoxon test

• levene: Levene's test

• fligner: Fligner-Killeen test

• kruskal: Kruskal test

• fisher: Fisher's exact test

• spearman: Spearman's test

Value

HTML elements

nuno-agostinho/psichomics documentation built on Feb. 11, 2024, 11:16 p.m.