Pfal_geneID2GO_curated: All curated GO terms mapped to _P. falciparum_ genes
In oberstal/pfGO: Plasmodium falciparum functional enrichment analysis tools
Pfal_geneID2GO_curated R Documentation
All curated GO terms mapped to P. falciparum genes
Description
A P. falciparum GO database containing all curated GO terms mapped to P. falciparum genes (from PlasmoDB release 66; accessed Sep 28, 2023).
Can be used as the geneID2GO input for run.topGO.meta.
Usage
data(Pfal_geneID2GO_curated)
Format
A list of 3454 named vectors–one vector for each Pf geneID to which GO terms are mapped. Each vector contains all curated GO-terms mapped to the geneID.
Source
Examples
run.topGO.meta(mydf = exampleMydf, geneID2GO = Pfal_geneID2GO_curated)
oberstal/pfGO documentation built on April 22, 2024, 7:15 a.m.
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| Pfal_geneID2GO_curated | R Documentation |
All curated GO terms mapped to P. falciparum genes
Description
A P. falciparum GO database containing all curated GO terms mapped to P. falciparum genes (from PlasmoDB release 66; accessed Sep 28, 2023).
Can be used as the geneID2GO input for run.topGO.meta.
Usage
data(Pfal_geneID2GO_curated)
Format
A list of 3454 named vectors–one vector for each Pf geneID to which GO terms are mapped. Each vector contains all curated GO-terms mapped to the geneID.
Source
Examples
run.topGO.meta(mydf = exampleMydf, geneID2GO = Pfal_geneID2GO_curated)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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