pf.genesets.mpmp: Curated _P. falciparum_ gene-sets.

In oberstal/pfGO: Plasmodium falciparum functional enrichment analysis tools

Curated P. falciparum gene-sets.

Description

curated P. falciparum metabolic pathways, gene-sets, GO terms from MPMP

Usage

data(pf.genesets.mpmp)

Format

A large data frame of 54090 rows and 5 columns.

Gene.ID

P. falciparum gene ID

Map.Name

name of the metabolic pathway map/other gene-set curated from publication; searchable at the MPMP website

Map_id

the mpmp website address for the pathway map if applicable/the mpmp page for that gene-set. Follow these links to view pathways of interest.)

Map.cat

appears to be the gene symbol (short name), or gene-product where available

pla.id

appears to be the GO term or enzyme-code where applicable/available

Details

Not sure about date of access or exact origins of this dataset, but shared from Chengqi Wang in April 2021.

Source

the Malaria Parasite Metabolic Pathways database (MPMP). https://mpmp.huji.ac.il

oberstal/pfGO documentation built on April 22, 2024, 7:15 a.m.