compute.CYT: Compute cytolytic activity score
In olapuentesantana/easier_manuscript: Evaluate patient immune response to ICBs through a systems approach
Description
Usage
Arguments
Value
Description
compute_CYT computes cytolytic activity score as the geometric mean of immune cytolytic genes
(Rooney et al., 2015).
Usage
1
compute.CYT(RNA.tpm)
Arguments
RNA.tpm
numeric matrix with rows=genes and columns=samples
Value
numeric matrix with rows=samples and columns=cytolytic activity score
olapuentesantana/easier_manuscript documentation built on Sept. 22, 2021, 9:42 p.m.
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Description Usage Arguments Value
Description
compute_CYT computes cytolytic activity score as the geometric mean of immune cytolytic genes
(Rooney et al., 2015).
Usage
1 | compute.CYT(RNA.tpm)
|
Arguments
RNA.tpm |
numeric matrix with rows=genes and columns=samples |
Value
numeric matrix with rows=samples and columns=cytolytic activity score
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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