load_ref_maf: This function checks and loads a reference set of maf expects...

Description Usage Arguments Value

View source: R/gwas.R

Description

This function checks and loads a reference set of maf expects three columns tab delim file with colnames chr,pos and maf

Usage

1
load_ref_maf(f, min.maf = 0.05)

Arguments

f

character scalar representing filename containing maf data expects three columns wtih names chr, pos and maf.

min.maf

scalar numeric representing minor allele threshold cut off.

Value

data.table object of minor allele freq.


ollyburren/rCOGS documentation built on Aug. 5, 2020, 2:13 p.m.