t1d.DT: t1d.DT GWAS data from Cooper et al. for Type 1 diabetes for...
In ollyburren/rCOGS: Computes gene prioritisation scores based on promoter capture Hi-C data
Description
t1d.DT
GWAS data from Cooper et al. for Type 1 diabetes for chromosome 22.
Usage
1
Format
data.table with 68300 rows and 7 variables
- pid
unique id obtained from chr and position
- chr
chromosome
- pos
position GRCh37
- p
univariate p value
- maf
minor allele freq from maf.DT
- ld
ld block from ld.gr
- ppi
posterior probability for variant to be causal
ollyburren/rCOGS documentation built on Aug. 5, 2020, 2:13 p.m.
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Description
t1d.DT GWAS data from Cooper et al. for Type 1 diabetes for chromosome 22.
Usage
1 |
Format
data.table with 68300 rows and 7 variables
- pid
unique id obtained from chr and position
- chr
chromosome
- pos
position GRCh37
- p
univariate p value
- maf
minor allele freq from maf.DT
- ld
ld block from ld.gr
- ppi
posterior probability for variant to be causal
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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