Files in omarwagih/siftr
generate SIFT scores directly in R
.DS_Store
DESCRIPTION
NAMESPACE
R/.DS_Store
R/siftr-helper.r
R/siftr-main.r
README.md
build/build_siftr.r
build/siftr_1.0.0.tar.gz
inst/.DS_Store
inst/extdata/.DS_Store
inst/extdata/P39709.alignedfasta
inst/extdata/images/siftr-logo-flat.svg
inst/extdata/images/siftr-logo.svg
inst/extdata/precomputed/.DS_Store
inst/extdata/precomputed/aa-freq.rds
inst/extdata/precomputed/default.amino.frq
inst/extdata/precomputed/default.diri
inst/extdata/precomputed/default.sij
inst/extdata/precomputed/diri.rds
inst/extdata/precomputed/process-precomputed.r
inst/extdata/precomputed/rank-matrix.rds
man/.DS_Store
man/.Rhistory
man/addLogs.Rd
man/checkUnequalSequenceLengths.Rd
man/diffAA.Rd
man/diffAA.siftr_matrix.Rd
man/filterPredictions.Rd
man/getEpsilonValues.Rd
man/infoContent.Rd
man/infoContent.siftr_matrix.Rd
man/letterMatrix.Rd
man/makePWM.Rd
man/makeSiftMatrix.Rd
man/medianInfoContent.Rd
man/medianOfArray.Rd
man/normalizeWeights.Rd
man/pbWeights.Rd
man/pbWeightsNorm.Rd
man/percentIdentity.Rd
man/positionInfoContent.Rd
man/predictFromAlignment.Rd
man/print.siftr_matrix.Rd
man/pseudo_diri.Rd
man/removeIdenticalSeqs.Rd
man/show.siftr_matrix.Rd
man/summary.siftr_matrix.Rd
