pbWeights: Compute a weight for each amino acid at each position
In omarwagih/siftr: generate SIFT scores directly in R
Description
Usage
Arguments
Value
Description
These weights are used to compute a sequence weight
denoting how much information each sequence is contributing
Usage
1
Arguments
aln_mat
alignment matrix generated from letterMatrix
return_all
if TRUE, returns intermediate variables computed (pfm, diff_aas, etc), otherwise just weight matrix
Value
numeric matrix of n sequences x m positions, with a weight for each cell
omarwagih/siftr documentation built on May 24, 2019, 1:50 p.m.
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Description Usage Arguments Value
Description
These weights are used to compute a sequence weight denoting how much information each sequence is contributing
Usage
1 |
Arguments
aln_mat |
alignment matrix generated from letterMatrix |
return_all |
if TRUE, returns intermediate variables computed (pfm, diff_aas, etc), otherwise just weight matrix |
Value
numeric matrix of n sequences x m positions, with a weight for each cell
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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