pbWeightsNorm: Normalizes weights computed by pbWeights

In omarwagih/siftr: generate SIFT scores directly in R

Description

This normalizes the pbWeights weight matrix using normalizeWeights then groups by amino acid for 20 x number of position matrix This is used to compute sume of weights for each position

Usage

pbWeightsNorm(pb_weights, aln_mat)

Arguments

pb_weights	weights computed from pbWeights function
aln_mat	alignment matrix generated from letterMatrix

Value

list of two elements: (1) matrix of normalized weights grouped by amino acids (20 x number of positions) (2) numeric vector of the sum of weights per positions

omarwagih/siftr documentation built on May 24, 2019, 1:50 p.m.