h5ad_to_adata: Use basilisk environment to read h5ad file and access anndata...

View source: R/dataset.R

h5ad_to_adataR Documentation

Use basilisk environment to read h5ad file and access anndata object

Description

Use basilisk environment to read h5ad file and access anndata object

Usage

h5ad_to_adata(h5ad_path, cells_in_obs)

Arguments

h5ad_path

path to h5ad file

cells_in_obs

boolean, if TRUE, cell identifiers are taken from obs layer in anndata object; if FALSE, they are taken from var

Value

matrix contained on h5ad file as dgCMatrix


omnideconv/SimBu documentation built on May 5, 2024, 12:33 p.m.