collapse_orthologs: Sum Expression of Orthologs in an ogset class elements
In othomantegazza/crossr: Functions For Cross Species Quantitative Transcriptomics
collapse_orthologs R Documentation
Sum Expression of Orthologs in an ogset class elements
Description
#' collapse_orthologs takes ogset class element as input
It sums the expression of all the genes in one orthogroup across the samples
and outputs an ogset class element containing the orthologs expression matrix
Usage
collapse_orthologs(og_set, mc.cores = 1)
Arguments
og_set
a ogset class element
mc.cores
numeric, the number of threads
Details
#' Some step are considerably slow and are parallelized with the function
mclapply from the package parallel the number of threads defaults to 1.
othomantegazza/crossr documentation built on Feb. 1, 2023, 7:44 a.m.
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| collapse_orthologs | R Documentation |
Sum Expression of Orthologs in an ogset class elements
Description
#' collapse_orthologs takes ogset class element as input
It sums the expression of all the genes in one orthogroup across the samples
and outputs an ogset class element containing the orthologs expression matrix
Usage
collapse_orthologs(og_set, mc.cores = 1)
Arguments
og_set |
a |
mc.cores |
|
Details
#' Some step are considerably slow and are parallelized with the function
mclapply from the package parallel the number of threads defaults to 1.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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