get_df: Returns a Tidy Dataset in Long Format with the Expression,...
In othomantegazza/crossr: Functions For Cross Species Quantitative Transcriptomics
get_df R Documentation
Returns a Tidy Dataset in Long Format with the Expression, Statistics and
Metadata for Selected Orthogoups
Description
The long dataset format provided by get_df can be used straight away to plot orthogroup
expression with ggplot2.
Usage
get_df(ogset, orthogroups, rank_stat = NULL, use_annos = FALSE)
Arguments
ogset
The ogset class element that contains the expression data.
orthogroups
The ortogroups for which we want to extract expression data
rank_stat
The ranking statistics that we want to extract, defaults to NULL.
use_annos
Should functional annotations be included in the dataset? Defaults to FALSE.
othomantegazza/crossr documentation built on Feb. 1, 2023, 7:44 a.m.
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| get_df | R Documentation |
Returns a Tidy Dataset in Long Format with the Expression, Statistics and Metadata for Selected Orthogoups
Description
The long dataset format provided by get_df can be used straight away to plot orthogroup
expression with ggplot2.
Usage
get_df(ogset, orthogroups, rank_stat = NULL, use_annos = FALSE)
Arguments
ogset |
The |
orthogroups |
The ortogroups for which we want to extract expression data |
rank_stat |
The ranking statistics that we want to extract, defaults to |
use_annos |
Should functional annotations be included in the dataset? Defaults to |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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