gffQTLs: A gff example for QTL annotation

In pablobio/GALLO: Genomic Annotation in Livestock for Positional Candidate LOci

Description

Data from the Animal QTLdb comprasing the bovine QTL annotation

Usage

data(gffQTLs)

Format

A data frame with 111742 rows and 6 variables:

• chr: Chromosome

• database: The database which the QTL information was retrieved

• QTL_type: The class of each QTL annotated in the database

• start_pos: Start position in the genome for each QTL

• end_pos: End position in the genome for each QTL

• extra_info: Additional information about the QTLs, such as QTL ID, Name, PUBMED ID, mapping type, among others

Examples

data(gffQTLs)

pablobio/GALLO documentation built on March 11, 2021, 2:59 p.m.