dim-BioFormatsImage-method: Find dimension of BioFormatsImage

In pachterlab/SpatialFeatureExperiment: Integrating SpatialExperiment with Simple Features in sf

Find dimension of BioFormatsImage

Description

This is different from other classes. The metadata is read where the dimensions in pixels can be found. The image itself is not read into memory here.

Usage

## S4 method for signature 'BioFormatsImage'
dim(x)

Arguments

x	A BioFormatsImage object.

Value

An integer vector of length 5 showing the number of rows and columns in the full resolution image. The 5 dimensions are in the order of XYCZT: x, y, channel, z, and time. This is not changed by transformations. Use ext to see the extent after transformation.

See Also

Other image methods: SFE-image, affineImg(), cropImg(), ext(), imgRaster(), imgSource(), mirrorImg(), rotateImg(), scaleImg(), translateImg(), transposeImg()

pachterlab/SpatialFeatureExperiment documentation built on Jan. 29, 2025, 10:32 p.m.