inst/script/visium_row_col.R

In pachterlab/SpatialFeatureExperiment: Integrating SpatialExperiment with Simple Features in sf

# I installed Space Ranger in my home directory
visium_row_col <- read.delim("~/spaceranger-1.3.1/lib/python/cellranger/barcodes/visium-v1_coordinates.txt",
                             header = FALSE,
                             col.names = c("barcode", "col", "row"))
usethis::use_data(visium_row_col, overwrite = TRUE)