Description Usage Arguments Value Examples
Convert a sleuth object to a matrix with the condition names.
1 | sleuth_to_matrix(obj, which_df, which_units)
|
obj |
a |
which_df |
character vector of length one. Which type of data to use ("obs_norm" or "obs_raw") |
which_units |
character vector of length one. Which units to use ("tpm" or "est_counts") |
a list
with an attribute 'data', which contains a matrix of target_ids
and transcript expression in which_units
1 2 | sleuth_matrix <- sleuth_to_matrix(sleuth_obj, 'obs_norm', 'tpm')
head(sleuth_matrix$data) # look at first 5 transcripts, sorted by name
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