closeImage-ms.image-method: Apply morphological closing to binary image.

In paoloinglese/SPUTNIK: Spatially Automatic Denoising for Imaging Mass Spectrometry Toolkit

Apply morphological closing to binary image.

Description

Apply morphological closing to binary image.

Usage

## S4 method for signature 'ms.image'
closeImage(object, kern.size = 5)

Arguments

object	ms.image-class object. See msImage.
kern.size	numeric. Kernel size.

Value

ms.image-class object after closing.

Examples

## Load package
library("SPUTNIK")

## Create ms.image-class object
msIm <- msImage(values = matrix(rnorm(200), 40, 50), name = "test", scale = TRUE)

## Generate binary image
msImBin <- refImageBinaryOtsu(msIm)

## Apply the morphological closing
msImClosed <- closeImage(msImBin, kern.size = 3)

paoloinglese/SPUTNIK documentation built on April 18, 2024, 8:56 p.m.