findClosestCOSMIC30_withSimilarity: Find closest COSMIC30 signatures
In pdiakumis/hrdetect: Signature Tools
Description
Usage
Arguments
Value
View source: R/signatures_utils.R
Description
Compares a set of signatures to the COSMIC30 signatures and
returns the list of signatures identified and the corresponding similarity. For example,
list(cosmic = c("C1","C3","C13"),cos.sim = c(0.94,0.85,0.7))
means that Cosmic (C) signatures 1, 3 and 13 were found, while
the corrsponding similarities to those signatures are 0.94, 0.85 and 0.7
Usage
1
Arguments
sigs
matrix with 96-channel substitution signatures as columns
Value
the list of signatures identified and corresponding similarities
pdiakumis/hrdetect documentation built on May 17, 2020, 5:30 p.m.
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Description Usage Arguments Value
View source: R/signatures_utils.R
Description
Compares a set of signatures to the COSMIC30 signatures and returns the list of signatures identified and the corresponding similarity. For example, list(cosmic = c("C1","C3","C13"),cos.sim = c(0.94,0.85,0.7)) means that Cosmic (C) signatures 1, 3 and 13 were found, while the corrsponding similarities to those signatures are 0.94, 0.85 and 0.7
Usage
1 |
Arguments
sigs |
matrix with 96-channel substitution signatures as columns |
Value
the list of signatures identified and corresponding similarities
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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