plot_HRDetect_BootstrapScores: plot_HRDetect_BootstrapScores

Description Usage Arguments

View source: R/HRDetect.R

Description

Overall plot of scores obtained from HRDetect with bootstrap.

Usage

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plot_HRDetect_BootstrapScores(
  outdir,
  hrdetect_res,
  main = "Distribution of HRDetect scores",
  mar = c(9, 4, 3, 2),
  pwidth = NULL,
  pheight = 1000,
  pres = 200
)

Arguments

outdir

output directory for the plot

hrdetect_res

output of HRDetect_pipeline, ran with bootstrap_scores=TRUE

main

plot title. If not specified: "Distribution of HRDetect scores"

mar

plot margin. If not specified: c(9,4,3,2)

pwidth

plot width in pixels. If not specified: max(1000,400+120*number_of_samples)

pheight

plot height in pixels. If not specified: 1000

pres

plot resolution. If not specified: 200


pdiakumis/hrdetect documentation built on May 17, 2020, 5:30 p.m.