calculate_distance: Calculate distance

Description Usage Arguments

Description

Calculate distance

Usage

1
calculate_distance(annot, method, col, ...)

Arguments

annot

A data.frame object containing sample annotation values

method

String similarity measure to be used. One of ("jw", "jaro", "sw1", "sw2", "nw1", "nw2", "nw3", "me", "lv", "dl", "osa", "lcs", "qgram", "cosine", "jaccard")

col

The column to be used to infer classes from. Default method "combine" attempts to combine all columns for class inferral.

...

Additional arguments to the distance functions


pedrostrusso/annotator documentation built on June 12, 2019, 11:23 a.m.