Files in pepfar-datim/datapackr
A Package that Packs and Unpacks all Data Packs and Target Setting Tools

.Rbuildignore

.circleci/config.yml

.github/pull_request_template.md

.gitignore

.lintr

.travis.yml

DESCRIPTION

LICENSE

NAMESPACE

NEWS.md R/adorn_import_file.R R/checkAnalytics.R R/checkColStructure.R R/checkInvalidIndicatorCodes.R R/checkMechanisms.R R/checkNotPEPFARSupportedPSNUs.R R/checkPSNUData.R R/check_params.R R/createAnalytics.R R/createDATIMExport.R R/createDataPack.R R/createKeychainInfo.R R/createPAWExport.R R/createTestDataset.R R/create_play_spectrum_output.R R/data.R R/datapackVsDatim.R R/datapackr.R R/evaluateIndicators.R R/exportDistributedMERToDATIM.R R/exportPackr.R R/extractModelDataFromPSNUxIM.R R/extractRawColumnData.R R/fetchPrioritizationTable.R R/generateApprovalMemo.R R/generateComparisonTable.R R/getCOPDataFromDATIM.R R/getCodeList.R R/getHTSModality.R R/getMechanismView.R R/getMemoIndicators.R R/getOPUDataFromDATIM.R R/getPSNUs.R R/handshakeFile.R R/loadDataPack.R R/map_COCs_to_COs.R R/map_Cs_to_COs.R R/memoStructure.R R/messageQueue.R R/packDataPack.R R/packDataPackSheet.R R/packForDATIM.R R/packOPUDataPack.R R/packPSNUxIM.R R/packSNUxIM.R R/packSheets.R R/packTool.R R/packageSetup.R R/prepareMemoData.R R/prepareSheetData.R R/prepare_model_data.PSNUxIM.R R/separateDataSets.R R/strip_wb_NAs.R R/unPackCountryUIDs.R R/unPackDataPack.R R/unPackDataPackName.R R/unPackOPUDataPack.R R/unPackPSNUxIM_API.R R/unPackSNUxIM.R R/unPackSchema.R R/unPackSheet.R R/unPackSheets.R R/unPackTool.R R/unPackToolSet.R R/unPackYear2Sheet.R R/unPackingChecks.R R/updatePSNUxIMTargetValues.R R/update_de_coc_co_map.R R/utilities.R R/utilsForPDAP.R R/validationSummary.R R/writeHomeTab.R R/writePSNUxIM.R R/writeSpectrumData.R README.md

data-raw/COP21/COP 2021 categoryOptionGroupSet.xml

data-raw/COP21/COP 2021 categoryOptionGroups.xml

data-raw/COP21/COP21OPU_Data_Pack_generation_script.R data-raw/COP21/COP21OPU_Data_Pack_processing_script.R data-raw/COP21/COP21OPU_PSNUxIM_generation_from_Data_Pack.R data-raw/COP21/COP21_Data_Pack_generation_script.R data-raw/COP21/COP21_Data_Pack_processing_script.R

data-raw/COP21/cop21_validation_rules.json

data-raw/COP21/update_cop21OPU_datapack_schema.R data-raw/COP21/update_cop21_datapack_schema.R

data-raw/COP22/COP 2022 categoryOptionGroupSet.json

data-raw/COP22/COP 2022 categoryOptionGroupSet.xml

data-raw/COP22/COP 2022 categoryOptionGroups.json

data-raw/COP22/COP 2022 categoryOptionGroups.xml

data-raw/COP22/COP22OPU_Data_Pack_generation_script.R data-raw/COP22/COP22OPU_Data_Pack_processing_script.R

data-raw/COP22/COP22_Data_Pack_Template_OldCascade.xlsx

data-raw/COP22/COP22_Data_Pack_Template_v2.xlsx

data-raw/COP22/COP22_Data_Pack_generation_script.R data-raw/COP22/COP22_Data_Pack_processing_script.R

data-raw/COP22/cop22_validation_rules.json

data-raw/COP22/update_cop22OPU_datapack_schema.R data-raw/COP22/update_cop22_datapack_schema.R data-raw/COP22/update_cop22_de_coc_co_map.R

data-raw/COP23/COP 2023 categoryOptionGroupSet.xml

data-raw/COP23/COP 2023 categoryOptionGroups.json

data-raw/COP23/COP 2023 categoryOptionGroups.xml

data-raw/COP23/COP23OPU_Data_Pack_generation_script.R data-raw/COP23/COP23OPU_Data_Pack_processing_script.R

data-raw/COP23/COP23_Data_Pack_Template_YR2 Targets.xlsx

data-raw/COP23/COP23_Data_Pack_Template_YR2 Targets_sjj.xlsx

data-raw/COP23/COP23_Data_Pack_Template_rows8_10.xlsx

data-raw/COP23/COP23_Data_Pack_Template_v1.xlsx

data-raw/COP23/COP23_Data_Pack_generation_script.R data-raw/COP23/COP23_Data_Pack_processing_script.R

data-raw/COP23/cop23_validation_rules.json

data-raw/COP23/generateCOP23TestData.R data-raw/COP23/generateRandomPSNUxIMModel.R data-raw/COP23/update_cached_de_coc_co_map.R data-raw/COP23/update_cop23_datapack_schema.R data-raw/COP23/update_cop23_de_coc_co_map.R data-raw/COP24/COP24_Data_Pack_generation_script.R data-raw/COP24/COP24_Data_Pack_processing_script.R data-raw/COP24/Test_Data.R

data-raw/COP24/cop24_metadata_DEsCOCs.csv

data-raw/COP24/cop24_metadata_organisationUnits.csv

data-raw/COP24/cop24_validation_rules.json

data-raw/COP24/update_cop24_datapack_schema.R data-raw/COP24/update_cop24_de_coc_co_map.R data-raw/COP24/update_cop24_psnuxim_schema.R data-raw/COP25/COP25_Data_Pack_generation_script.R data-raw/COP25/COP25_Data_Pack_processing_script.R

data-raw/COP25/cop25_metadata_organisationUnits.csv

data-raw/COP25/cop25_validation_rules.json

data-raw/COP25/update_cop25_datapack_schema.R data-raw/COP25/update_cop25_de_coc_co_map.R data-raw/COP25/update_cop25_psnuxim_schema.R data-raw/Export_Data_Entry_Forms.R data-raw/Validate_model_data.R data-raw/cop_validation_rules.R data-raw/extract-spectrum-data.R data-raw/generate_play_spectrum_output.R

data-raw/play_credentials.json

data-raw/testCompareDataPackBeforeAferPSNUxIM.R data-raw/test_datasets.R data-raw/update_cached_PSNUs.R data-raw/update_cached_map_datapack_cogs.R data-raw/update_orgunit_levels_cache.R data-raw/update_style_guide.R

data/COP21_datapacks_countries.rda

data/cop21OPU_data_pack_schema.rda

data/cop21_data_pack_schema.rda

data/cop21_map_DataPack_DATIM_DEs_COCs.rda

data/cop22OPU_data_pack_schema.rda

data/cop22_data_pack_schema.rda

data/cop22_map_DataPack_DATIM_DEs_COCs.rda

data/cop22_map_adorn_import_file.rda

data/cop22_valid_PSNUs.rda

data/cop23_data_pack_schema.rda

data/cop23_map_DataPack_DATIM_DEs_COCs.rda

data/cop23_psnuxim_schema.rda

data/cop24_data_pack_schema.rda

data/cop24_datapack_countries.rda

data/cop24_map_DataPack_DATIM_DEs_COCs.rda

data/cop24_psnuxim_schema.rda

data/cop25_data_pack_schema.rda

data/cop25_datapack_countries.rda

data/cop25_map_DataPack_DATIM_DEs_COCs.rda

data/cop25_psnuxim_schema.rda

data/cop_datapack_countries.rda

data/cop_validation_rules.rda

data/datapack_cogs.rda

data/dataset_levels.rda

data/map_DataPack_DATIM_DEs_COCs.rda

data/prioritizations.rda

data/styleGuide.rda

data/valid_OrgUnits.rda

data/valid_OrgUnits_2024.rda

data/valid_OrgUnits_2025.rda

data/valid_PSNUs.rda

datapackr.Rproj

inst/extdata/COP21_Data_Pack_Template.xlsx

inst/extdata/COP21_OPU_Data_Pack_Template.xlsx

inst/extdata/COP22_Data_Pack_Template.xlsx

inst/extdata/COP22_OPU_Data_Pack_Template.xlsx

inst/extdata/COP23_Data_Pack_Template.xlsx

inst/extdata/COP23_OPU_Data_Pack_Template.xlsx

inst/extdata/COP23_PSNUxIM_Template.xlsx

inst/extdata/COP24_Data_Pack_Template.xlsx

inst/extdata/COP24_PSNUxIM_Template.xlsx

inst/extdata/COP25_Data_Pack_Template.xlsx

inst/extdata/COP25_PSNUxIM_Template.xlsx

inst/extdata/draft_memo_template.docx

man/COP21_datapacks_countries.Rd man/MessageQueue.Rd man/add_dp_label.Rd man/addcols.Rd man/adorn_import_file.Rd man/analyze_eid_2mo.Rd man/analyze_indexpos_ratio.Rd man/analyze_linkage.Rd man/analyze_pmtctknownpos.Rd man/analyze_retention.Rd man/analyze_tbknownpos.Rd man/analyze_vmmc_indeterminate.Rd man/appendMessage.MessageQueue.Rd man/appendMessage.Rd man/appendUnallocatedData.Rd man/aws.executeapi.Rd man/cache_is_fresh.Rd man/calculateFinalDedupeValues.Rd man/canReadFile.Rd man/can_spawn.Rd man/changePDAPJobApprovalStatus.Rd man/checkAnalytics.Rd man/checkColStructure.Rd man/checkHasPSNUxIM.Rd man/checkInvalidIndicatorCodes.Rd man/checkMechanisms.Rd man/checkNonEqualTargets.Rd man/checkNonNumericPSNUxIMValues.Rd man/checkNotPEPFARSupportedPSNUs.Rd man/checkPSNUData.Rd man/checkPSNUxIMDisaggs.Rd man/compareData_DatapackVsDatim.Rd man/compareData_OpuDatapackVsDatim.Rd man/cop21OPU_data_pack_schema.Rd man/cop21_data_pack_schema.Rd man/cop21_map_DataPack_DATIM_DEs_COCs.Rd man/cop22OPU_data_pack_schema.Rd man/cop22_data_pack_schema.Rd man/cop22_map_DataPack_DATIM_DEs_COCs.Rd man/cop22_map_adorn_import_file.Rd man/cop22_valid_PSNUs.Rd man/cop23_data_pack_schema.Rd man/cop23_map_DataPack_DATIM_DEs_COCs.Rd man/cop23_psnuxim_schema.Rd man/cop24_data_pack_schema.Rd man/cop24_datapack_countries.Rd man/cop24_map_DataPack_DATIM_DEs_COCs.Rd man/cop24_psnuxim_schema.Rd man/cop_datapack_countries.Rd man/cop_validation_rules.Rd man/countryUIDs_homeCell.Rd man/createAnalytics.Rd man/createDATIMExport.Rd man/createDataPack.Rd man/createKeychainInfo.Rd man/createPAWExport.Rd man/createTestDataset.Rd man/create_play_spectrum_output.Rd man/dataPackName_homeCell.Rd man/datapack_cogs.Rd man/datapackr.Rd man/datapackrSupports.Rd man/datapackr_params.Rd man/dataset_levels.Rd man/defaultMemoFont.Rd man/defaultMemoStyleHeader.Rd man/defaultMemoStylePara.Rd man/default_catOptCombo.Rd man/deleteExistingPDAPJobs.Rd man/dropDuplicatedPSNUxIMColumns.Rd man/dropInvalidMechColumns.Rd man/evaluateIndicators.Rd man/exportDistributedDataToDATIM.Rd man/exportPackr.Rd man/extractDuplicateRows.Rd man/extractOriginalTargets.Rd man/extractRawColumnData.Rd man/extractSNUxIMCombos.Rd man/extract_uid.Rd man/fetchPrioritizationTable.Rd man/formatSetStrings.Rd man/fresh_cache_part.Rd man/generateApprovalMemo.Rd man/generateComparisonTable.Rd man/generateMemoTemplate.Rd man/generatePSNUxIMComparison.Rd man/getCOPDataFromDATIM.Rd man/getCOPDatasetUids.Rd man/getCodeList.Rd man/getColumnsToKeep.Rd man/getCurrentCOPYear.Rd man/getDataPackOrgUnits.Rd man/getExistingFileS3Location.Rd man/getExistingPDAPJobs.Rd man/getHTSModality.Rd man/getHeaderColumns.Rd man/getMapDataPack_DATIM_DEs_COCs.Rd man/getMaxCores.Rd man/getMechanismView.Rd man/getMemoIndicators.Rd man/getOPUDataFromDATIM.Rd man/getOUFromCountryUIDs.Rd man/getPDAPJobsAPIURL.Rd man/getPSNUInfo.Rd man/getPresignedURL.Rd man/getSaneName.Rd man/getValidOrgUnits.Rd man/handshakeFile.Rd man/headerRow.Rd man/initiatePDAPJob.Rd man/interactive_message.Rd man/interactive_print.Rd man/interactive_warning.Rd man/is_uidish.Rd man/listWorkbookContents.Rd man/loadDataPack.Rd man/loadSheets.Rd man/map_COCs_to_COs.Rd man/map_Cs_to_COs.Rd man/map_DataPack_DATIM_DEs_COCs.Rd man/memoStructure.Rd man/mergeDatapack.Rd man/op-missing-default.Rd man/packDataPack.Rd man/packDataPackSheet.Rd man/packDataPackSheets.Rd man/packForDATIM.Rd man/packOPUDataPack.Rd man/packPSNUxIM.Rd man/packSNUxIM.Rd man/packTool.Rd man/parameter-checks.Rd man/parsePSNUs.Rd man/parse_maybe_number.Rd man/paste_dataframe.Rd man/paste_oxford.Rd man/pickUIDFromType.Rd man/pick_schema.Rd man/pick_template_path.Rd man/prepareExistingDataAnalytics.Rd man/prepareMemoData.Rd man/prepareMemoDataByAgency.Rd man/prepareMemoDataByPSNU.Rd man/prepareMemoDataByPartner.Rd man/prepareMemoDataByPrio.Rd man/prepareMemoMetadata.Rd man/prepareSheetData.Rd man/prepare_model_data.PSNUxIM.Rd man/printMessages.MessageQueue.Rd man/printMessages.Rd man/prioritization_dict.Rd man/prioritizations.Rd man/readSheet.Rd man/recalculateDedupeValues.Rd man/reexports.Rd man/renderAgencyTable.Rd man/renderPartnerTable.Rd man/renderPrioTable.Rd man/round_trunc.Rd man/rowMax.Rd man/schema-validations.Rd man/separateDataSets.Rd man/skip_tabs.Rd man/strip_wb_NAs.Rd man/styleGuide.Rd man/supportedCOPYears.Rd man/supportedTools.Rd man/swapColumns.Rd man/testDropPositiveDedupe.Rd man/testImbalancedDistribution.Rd man/testInvalidDedupeValues.Rd man/testInvalidPSNUs.Rd man/testMissingDedupeRollupColumns.Rd man/testMissingRightSideFormulas.Rd man/testNegativeTargetValues.Rd man/testRoundDecimalValues.Rd man/testRoundingDiffs.Rd man/toolName_homeCell.Rd man/uid_pattern.Rd man/unPackCountryUIDs.Rd man/unPackDataChecks.Rd man/unPackDataPack.Rd man/unPackDataPackName.Rd man/unPackDataPackSheet.Rd man/unPackOPUDataPack.Rd man/unPackSNUxIM.Rd man/unPackSheets.Rd man/unPackTool.Rd man/unPackToolSet.Rd man/unpackYear2Sheet.Rd man/updatePSNUxIMTargetValues.Rd man/update_de_coc_co_map.Rd man/uploadDATIMExportToPDAP.Rd man/valid_OrgUnits.Rd man/valid_OrgUnits_2024.Rd man/valid_PSNUs.Rd man/validationSummary.Rd man/writeHomeTab.Rd man/writePDAPExportCSV.Rd man/writePSNUxIM.Rd man/writeSpectrumData.Rd man/zerosToDashes.Rd

renv.lock

tests/testthat.R

tests/testthat/config/test-config.json

tests/testthat/helper.R

tests/testthat/play.dhis2.org/2.36.1/api/36/data.json-3b3c4f.json

tests/testthat/play.dhis2.org/2.36.1/api/36/dataValueSets.csv-c2768a.R

tests/testthat/play.dhis2.org/2.36.1/api/dataValueSets.json-16f9cd.json

tests/testthat/setup.R

tests/testthat/sheets/COP21_DP_random_with_psnuxim.xlsx

tests/testthat/sheets/COP22_DataPack_unPackingChecks.rds

tests/testthat/sheets/COP22_Data_Pack_Template_minimal.xlsx

tests/testthat/sheets/COP23_Data_Pack_Template_v1.xlsx

tests/testthat/sheets/COP23_SNUxIM_Model_Random.rds

tests/testthat/sheets/COP23_datapack_model_data_random_MW.rds

tests/testthat/sheets/COP23_model_data_random.rds

tests/testthat/sheets/COP23_sample_DataPack_Malawi.xlsx

tests/testthat/sheets/COP23_sample_PSNUxIM_Malawi.xlsx

tests/testthat/sheets/COP23_spectrum_data_random_MW.rds

tests/testthat/sheets/COP24_DataPack_unPackingChecks.xlsx

tests/testthat/sheets/COP24_Data_Pack_Template_minimal.xlsx

tests/testthat/sheets/COP24_datapack_model_data_random_MW.rds

tests/testthat/sheets/COP24_sample_DataPack_Malawi.xlsx

tests/testthat/sheets/COP24_spectrum_data_random_MW.rds

tests/testthat/sheets/COP25_datapack_model_data_random_MW.rds

tests/testthat/sheets/COP25_spectrum_data_random_MW.rds

tests/testthat/training.datim.org/api/33/categoryOptionCombos-0d0e1b.json

tests/testthat/training.datim.org/api/33/categoryOptionCombos.json-c119e4.json

tests/testthat/training.datim.org/api/33/dataElementGroupSets/LxhLO68FcXm.json-25a82e.json

tests/testthat/training.datim.org/api/33/dataElementGroupSets/lD2x0c8kywj.json-25a82e.json

tests/testthat/training.datim.org/api/33/dataElementGroups.json-b17d06.json

tests/testthat/training.datim.org/api/33/dataElements-74e9df.json

tests/testthat/training.datim.org/api/33/dataStore/dataSetAssignments/orgUnitLevels.json

tests/testthat/training.datim.org/api/33/dataValueSets.csv-1a73cf.json

tests/testthat/training.datim.org/api/33/dataValueSets.csv-da6b12.json

tests/testthat/training.datim.org/api/33/indicatorGroups.json-62e0b2.json

tests/testthat/training.datim.org/api/33/organisationUnits.json-6d090e.json

tests/testthat/training.datim.org/api/33/organisationUnits.json-7cdd11.json

tests/testthat/training.datim.org/api/IndicatorGroups.json-9480db.json

tests/testthat/training.datim.org/api/analytics.json-38bb59.json

tests/testthat/training.datim.org/api/analytics.json-3cd68b.json

tests/testthat/training.datim.org/api/analytics.json-728bb8.json

tests/testthat/training.datim.org/api/analytics.json-731145.json

tests/testthat/training.datim.org/api/analytics.json-984f3c.json

tests/testthat/training.datim.org/api/analytics.json-aa38a7.json

tests/testthat/training.datim.org/api/analytics.json-b189fb.json

tests/testthat/training.datim.org/api/analytics.json-d2d917.json

tests/testthat/training.datim.org/api/analytics.json-e8379f.json

tests/testthat/training.datim.org/api/categories.json-6b391d.json

tests/testthat/training.datim.org/api/categoryOptionCombos.json-bf5e01.json

tests/testthat/training.datim.org/api/categoryOptionGroups.json-53e429.json

tests/testthat/training.datim.org/api/categoryOptions.json-f54cb0.json

tests/testthat/training.datim.org/api/dataElementGroupSets.json-653db0.json

tests/testthat/training.datim.org/api/dataElementGroupSets.json-c713e8.json

tests/testthat/training.datim.org/api/dataSets.json-440100.json

tests/testthat/training.datim.org/api/dataValueSets.json-1d0033.json

tests/testthat/training.datim.org/api/dataValueSets.json-3875a2.json

tests/testthat/training.datim.org/api/dataValueSets.json-681f50.json

tests/testthat/training.datim.org/api/dataValueSets.json-8ae22d.json

tests/testthat/training.datim.org/api/dataValueSets.json-b958a6.json

tests/testthat/training.datim.org/api/dataValueSets.json-fb4c20.json

tests/testthat/training.datim.org/api/indicatorGroups.json-28d3ec.json

tests/testthat/training.datim.org/api/indicatorGroups.json-2e6258.json

tests/testthat/training.datim.org/api/indicatorGroups.json-5dfc95.json

tests/testthat/training.datim.org/api/me.json

tests/testthat/training.datim.org/api/organisationUnits.json-638de1.json

tests/testthat/training.datim.org/api/organisationUnits.json-dd4e67.json

tests/testthat/training.datim.org/api/organisationUnits.json-e52f07.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-1db38d.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-33cb41.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-36e130.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-4592d2.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-528114.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-5d5588.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-6d62df.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-812ffa.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-96cf37.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-a05883.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-a2a615.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-a4240d.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-ab5894.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-c206d9.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-d4d8a3.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-da7bfe.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-e233a9.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-e787dc.json

tests/testthat/training.datim.org/api/sqlViews/DotdxKrNZxG/data.json-efe7c1.json

tests/testthat/training.datim.org/api/sqlViews/fgUtV6e9YIX/data.json-3b3c4f.json

tests/testthat/triage.testing.datim.org/api/analytics.json-dd2b2d.json

tests/testthat/triage.testing.datim.org/api/organisationUnits.json-dab38c.json

tests/testthat/triage.testing.datim.org/api/sqlViews/fgUtV6e9YIX/data.json-3b3c4f.json

pepfar-datim/datapackr documentation built on Jan. 14, 2025, 7:11 a.m.

rdrr.io home R language documentation Run R code online

CRAN packages Bioconductor packages R-Forge packages GitHub packages

Note that we can't provide technical support on individual packages. You should contact the package authors for that.

pepfar-datim/datapackr
A Package that Packs and Unpacks all Data Packs and Target Setting Tools

Files in pepfar-datim/datapackr
A Package that Packs and Unpacks all Data Packs and Target Setting Tools

R Package Documentation

Browse R Packages

We want your feedback!

pepfar-datim/datapackr A Package that Packs and Unpacks all Data Packs and Target Setting Tools

Files in pepfar-datim/datapackr A Package that Packs and Unpacks all Data Packs and Target Setting Tools

R Package Documentation

Browse R Packages

We want your feedback!

pepfar-datim/datapackr
A Package that Packs and Unpacks all Data Packs and Target Setting Tools

Files in pepfar-datim/datapackr
A Package that Packs and Unpacks all Data Packs and Target Setting Tools