plot.simulation: Animate a Simulation

In petrelharp/landsim: Simulate Populations on Landscapes

Description

Sequentially plot the time steps in a simulation, optionally cropped.

Usage

plot.simulation(sim, pop, max.frames = 300, zlim = range(sim$N, finite =
  TRUE), pause = interactive(), legend.width = 2, legend.mar = 12,
  animate = NULL, cleanup = FALSE, duration = 10, height = 2,
  width = length(pop$genotypes) * 2, res = 300, pointsize = 10, ...)

Arguments

sim	A simulation object.
pop	The corresponding population object.
max.frames	Maximum number of frames to plot.
zlim	Range of values to represent by colors, consistently.
pause	Pause for user input between frames? (left click to continue, right click to stop)
legend.width, legend.mar	Parameters controlling how the legend is displayed.
animate	If not FALSE, instead of plotting the result, package frames into an mp4 animation with this file name.
cleanup	Whether to delete pngs produced if 'animate' is TRUE.
duration	Duration of the animation in seconds.
...	Additional parameters passed to plot( ).

petrelharp/landsim documentation built on May 25, 2019, 2:53 a.m.