plot_lineages: Plot Lineages on a Map

In petrelharp/landsim: Simulate Populations on Landscapes

Description

Plot the path traced out by lineages on the habitat of the corresponding population.

Usage

plot_lineages(lineages, pop, cols = rainbow(dim(lineages)[1]), plot = TRUE,
  ...)

Arguments

lineages	An array indexed by (lineage,location-or-genotype,time).
pop	A population object.
cols	A vector of colors.
plot	Do the plot? Otherwise, just compute coordinates.
...	Other parameters to pass to arrows().

Value

Invisibly returns an array of lineage locations, with dimensions indexed by (lineage, time, (x,y)) .

petrelharp/landsim documentation built on May 25, 2019, 2:53 a.m.