pathogen_code: Regex pathogen code in FASTA header.
In phac-nml-phrsd/angedist: Antigenic Genetic Distance
pathogen_code R Documentation
Regex pathogen code in FASTA header.
Description
Return the pathogen code as written in the FASTA header.
Usage
pathogen_code(p, seq.source)
Arguments
p
String. Pathogen name.
seq.source
String. Source of sequence data (e.g., GISAID)
Value
String for a REGEX search.
phac-nml-phrsd/angedist documentation built on Nov. 27, 2022, 7:23 p.m.
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| pathogen_code | R Documentation |
Regex pathogen code in FASTA header.
Description
Return the pathogen code as written in the FASTA header.
Usage
pathogen_code(p, seq.source)
Arguments
p |
String. Pathogen name. |
seq.source |
String. Source of sequence data (e.g., GISAID) |
Value
String for a REGEX search.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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