plot_pileup: Plot a pileup
In phac-nml/pavian: Visualize and analyze metagenomics classification results
Description
Usage
Arguments
Value
View source: R/alignment-plot_pileup.R
Description
Plot a pileup
Usage
1
plot_pileup(pileup, seq_info_df = NULL, nwin = 500, text_size = 5)
Arguments
pileup
The output from get_pileup
seq_info_df
Data.frame with information on sequences
nwin
Number of points to evaluated to evaluate smoother at, when show_loess is TRUE
text_size
Legend text size
Value
ggplot of pileup
phac-nml/pavian documentation built on Aug. 20, 2019, 5:54 a.m.
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Description Usage Arguments Value
View source: R/alignment-plot_pileup.R
Description
Plot a pileup
Usage
1 | plot_pileup(pileup, seq_info_df = NULL, nwin = 500, text_size = 5)
|
Arguments
pileup |
The output from |
seq_info_df |
Data.frame with information on sequences |
nwin |
Number of points to evaluated to evaluate smoother at, when |
text_size |
Legend text size |
Value
ggplot of pileup
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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