amr_presence: Adds the AMR_gene column to report
In phac-nml/plasmidprofiler: Visualization of Plasmid Profile Results
View source: R/report_related.R
amr_presence R Documentation
Adds the AMR_gene column to report
Description
Appends the results of amr_positives to the report
in column AMR_gene, missing have "-" instead
Usage
amr_presence(report, pos.samples)
Arguments
report
Dataframe of results produced
by subsampler or combine_results
pos.samples
Two column DF of plasmid names and genes present produced
by amr_positives
Value
Report with AMR_genes added
See Also
subsampler, combine_results
Examples
## Not run:
amr_presence(report, pos.samples)
## End(Not run)
phac-nml/plasmidprofiler documentation built on June 11, 2022, 11:25 a.m.
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View source: R/report_related.R
| amr_presence | R Documentation |
Adds the AMR_gene column to report
Description
Appends the results of amr_positives to the report in column AMR_gene, missing have "-" instead
Usage
amr_presence(report, pos.samples)
Arguments
report |
Dataframe of results produced
by |
pos.samples |
Two column DF of plasmid names and genes present produced
by |
Value
Report with AMR_genes added
See Also
subsampler, combine_results
Examples
## Not run: amr_presence(report, pos.samples) ## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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